CI01000004_14612987_14614652


Basic Information

Item Value
gene id CI01000004_14612987_14614652
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14612987 ~ 14614652 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14612987_14614652.mRNA
ATGGAGAGATGCTTTCTACTGATTCTTCTATCTGTGCCAGGGTTTCTGTCTGACAGCATTGAACCAAAAGACAAGGAAACTAATATTTACAGAAATGAAGAAGAACGTGTAACTCTGAGCTGCTCATATGATTCAAGCAGCAGTTTTATTTTGCTTTACTGGTACAGACAGTATCCTAATAAAGAACCAGAATATTTACTGTATAAAGGTGCTCAATCACGGAGCAGTTATGAGAATATACCAGACCGTCAACGGTTTCAGTCGACTACATCCCAATCATCCACTGAACTCATTATTAACAGTGGCACTTTGGGGAATGTCATCACTCCAGTCCAAAATGAGATGTCCCGTCCAGAGGGAGCAAATATTACTCTGTCTTGTAACTACTCTTCTTCAGCATATAGTCTACAGTGGTATCGCCAATATCCCGGACAAGCTCCAAAATATCTTTTTGTCATTCAATATGCTACTGGGAAAGTTACACAAATATCAGAAATTGTCAGTCTAGATCCTCGATTCTCTGCAAAACTGAATGAAAAGAAAACCCACATGTATCTGGAGATCTCCACAGCTAAAGTGACAGACTCTGCAATTTACTACTGTGCCCTG

Function

NR:

description
T-cell receptor alpha variable region, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14612987_14614652.mRNA False 609 mRNA 0.40 3 14612987 14614652

Neighbor

gene id symbol gene type direction distance location
CI01000004_14611052_14612588 NA coding downstream 399 14611052 ~ 14612588 (-)
CI01000004_14597582_14610531 NA coding downstream 2456 14597363 ~ 14610531 (-)
CI01000004_14591958_14594875 NA coding downstream 18112 14591276 ~ 14594875 (-)
CI01000004_14574723_14575066 NA coding downstream 37921 14573281 ~ 14575066 (-)
CI01000004_14571792_14572305 NA coding downstream 40561 14571741 ~ 14572426 (-)
CI01000004_14618502_14618962 NA coding upstream 3504 14618156 ~ 14619037 (-)
CI01000004_14630753_14632419 NA coding upstream 15257 14629909 ~ 14632568 (-)
CI01000004_14640200_14640642 NA coding upstream 25396 14640048 ~ 14641353 (-)
CI01000004_14643356_14643791 NA coding upstream 28552 14643204 ~ 14643878 (-)
CI01000004_14644611_14654183 NA coding upstream 29405 14644057 ~ 14654235 (-)
G33758 NA non-coding downstream 23959 14588598 ~ 14589028 (-)
CI01000004_14557340_14560918 TRAC non-coding downstream 55081 14557281 ~ 14561042 (-)
G33650 NA non-coding downstream 85360 14527408 ~ 14527627 (-)
G33648 NA non-coding downstream 86848 14525935 ~ 14526139 (-)
G33638 NA non-coding downstream 91409 14521367 ~ 14521578 (-)
G34461 NA non-coding upstream 72785 14687437 ~ 14693318 (-)
G34479 NA non-coding upstream 92071 14706723 ~ 14707120 (-)
CI01000004_14756092_14758171 NA non-coding upstream 143045 14755814 ~ 14758237 (-)
G33756 NA other downstream 27242 14585171 ~ 14585745 (-)
G33755 NA other downstream 31114 14581406 ~ 14581873 (-)
G33750 NA other downstream 33986 14578458 ~ 14579001 (-)
G33746 NA other downstream 43723 14568793 ~ 14569264 (-)
G33783 NA other upstream 23199 14637851 ~ 14638474 (-)
G34459 NA other upstream 57887 14672539 ~ 14673015 (-)
CI01000004_14676793_14679785 NA other upstream 64487 14676422 ~ 14679856 (-)
CI01000004_14742838_14744316 NA other upstream 129200 14742807 ~ 14744507 (-)

Expression


Co-expression Network