CI01000004_15126731_15131774


Basic Information

Item Value
gene id CI01000004_15126731_15131774
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15126684 ~ 15132238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15126731_15131774.mRNA
CTATAAAGTGGGAGACTTGGTTCACTCACCGAGTCACTCATGCAAACATGTGGTTCCAGCATGATGTGTGCACAAATTGCACTCAAACAAGGCCTTTGAGGTGGGAATCGGAGCCAGTCCGCTTCCTTATAAGGGCAAAGGAAGCTGAATGGGGAACTCCTAAGGGGTGCGACGCAGCTTACAAGCTGTGCCAGCTGCGGAGACAGTGTGTTTGGACTGAGAGAGACTTAGATGGGACAAATTGGTTGGATCTGTCCTTGTGGGAACGTACATGCGTGGAGCAGGGCGTCAGGGAGATATACGGCAGGCCGTTTCACACCTCTGCCGTGAAACTGCGTAAAGCAGGCGGTTCACATGCATGGCAGAGGATTTCTGACCTGGTCCCCATTGGACTCCCGCTGAGAAGGGCTGTTGCAGATATCAGCTGCACAGGTGTCAAACCTCACTCCTGCTTTCCCAAACAAGCCACCCTCAGTGCAAAGAGTGTAACTTACTCCTCTAACACATGCATCCGCCTGTTTGAATAGAGCACAGGGAACCAGGACTGTTTACATGCAAAGGACCTACGTGGAAAGGCTGCTAGGATGATCCAATTAGATATGTTATCAGGACAGGTGACTAGGTGTAAAGTATTTTTGTTGTTGTTGCAGTGAAATGAAGGCAGTACTGTTCCTGTAACTGTTTTAAAAAAAGTCAATACACATTACATAATGCATGCAACACATTTCCTTGAGTTGAAGCAGGTAAACAAATGAGAAACATTCTTTGAGCTTCTTCCTCTAGGAAGAAAAGGCCTGGTCAAGTGCCAACAATGCTGTTGTTTTTTGATTTTTGTTTTTTCTCTTAAATGCATGATACCGACCTATTCTTTCTTAAATGACATGTCCCTTCTCTTGCATTGATCAAACTAGGGCAGCACAATTAACTATAAAAATAATGATAATTTGATAGTATTGATTAATAGATAAAACAGCAATGAAATAATGCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15126731_15131774.mRNA True 991 mRNA 0.44 4 15126684 15132238

Neighbor

gene id symbol gene type direction distance location
CI01000004_15110181_15110483 NA coding upstream 16059 15109598 ~ 15110625 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB coding upstream 29511 15091200 ~ 15097173 (+)
CI01000004_15056504_15062261 RABGAP1L2 coding upstream 63504 15055922 ~ 15063180 (+)
CI01000004_15048166_15051524 NA coding upstream 73867 15048166 ~ 15052817 (+)
CI01000004_15010164_15028433 NRD1A, NRDC coding upstream 97976 15010164 ~ 15028708 (+)
CI01000004_15200553_15209521 SLC1A8B coding downstream 66004 15198242 ~ 15209824 (+)
CI01000004_15229290_15233374 PEX19 coding downstream 96538 15228776 ~ 15234597 (+)
CI01000004_15237719_15253901 COPA coding downstream 105481 15237719 ~ 15254158 (+)
CI01000004_15260416_15262090 APODA.2 coding downstream 128001 15260239 ~ 15262240 (+)
CI01000004_15277204_15286845 SAMD7 coding downstream 144966 15277204 ~ 15286987 (+)
G34031 NA non-coding upstream 19985 15106422 ~ 15106699 (+)
G34028 NA non-coding upstream 22516 15103966 ~ 15104168 (+)
G34027 NA non-coding upstream 23107 15103350 ~ 15103577 (+)
G34017 NA non-coding upstream 32309 15094105 ~ 15094375 (+)
G34009 NA non-coding upstream 81239 15045242 ~ 15045445 (+)
G33896 NA non-coding downstream 91423 15223661 ~ 15223914 (+)
G34055 NA non-coding downstream 103892 15236130 ~ 15236383 (+)
G34061 NA non-coding downstream 139406 15271644 ~ 15271905 (+)
G33857 NA non-coding downstream 287023 15419261 ~ 15425806 (+)
G34090 NA non-coding downstream 300930 15433168 ~ 15433373 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1089784 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2470973 12646838 ~ 12652570 (+)
G31865 NA other upstream 2931537 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3459025 11666900 ~ 11667659 (+)
G34220 NA other downstream 807119 15939357 ~ 15939950 (+)
G33815 NA other downstream 931177 16063415 ~ 16066464 (+)
G34400 NA other downstream 1845090 16971995 ~ 17025976 (+)

Expression


Co-expression Network