CI01000004_15561061_15573201 (HIAT1A, MFSD14A)


Basic Information

Item Value
gene id CI01000004_15561061_15573201
gene name HIAT1A, MFSD14A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15559909 ~ 15573201 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15561061_15573201.mRNA
ATGAACGCTGCACTGACAAGACTTAACGTCTCAGCAAGTGGCACAGCTTTGCTCTTTCAGACAGTGCAGTCGAGCTCTGCTTCAGTGCCATATCAAATGAACACAGCAGGTGTTACATCAGACATTCCCCCAGCACACATTCCTGATGAACGGACTTATTCATGGTGTCAAGAGATAAGAGTCATGATTAGGGCTAGCTACTCTTACGTTGCCATGTTTATTTATGATAAACCCTGGTCACACGGTGATGCCCTTAAATACGGTAAAGTGGGAACAGAATTTACCAGTTTAAACCTCACCGATAAACAAGATTCTGCAATCCAGCCTGATCCGAATATTAATGGCCTGCTGTCTTTCCTGAGTGCTCCATTAATCGGTGCTCTGTCAGATGTGTGGGGCCGGAAGTCCTTCCTGCTGCTCACTGTGTTTTTCACCTGTGCTCCCATCCCTCTCATGAAGATCAGCCCATGGTGGTACTTTGCAGTGATCTCCATGTCTGGTGTGTTTGCGGTCACTTTCTCTGTGATCTTTGCATATGTGGCCGATATCACCCAGGAGCATGAGAGGAGCACAGCATATGGCCTGGTATCGGCCACTTTTGCAGCCAGCCTGGTGACAAGCCCAGCGATCGGTGCGTACCTGTCAGAGGCGTATGGAGATACATTGGTGGTGATCCTCGCCACGGCCATTGCCCTGCTCGACATCTGTTTTATCCTGGTAGCGGTTCCTGAGTCCCTGCCTGAGAAGATGAGACCGGCCTCCTGGGGGGCCCCCATCTCCTGGGAGCAGGCAGACCCCTTTGCATCCTTGCGTAAGGTGGGCCAGGACTCCACGGTTCTCCTGATCTGCATCACAGTCTTCCTTTCCTACCTTCCTGAGGCTGGACAGTATTCCAGTTTCTTCCTGTATCTCAGACAGGTCATTGGATTTACGTCAGAAACAGTTGCTGCCTTCATTGCTGTGGTGGGAATCCTGTCCATCTTGGCTCAGACGGTTGTCCTGGGAATCCTGATGCGTTCCATAGGGAATAAGAACACTATTTTGTTAGGCCTCGGCTTTCAAATCCTACAGCTGGCCTGGTACGGCTTTGGCTCCCAGCCCTGGATGATGTGGGCCGCTGGAGCTGTTGCTGCCATGTCCAGCATCACCTTCCCAGCAATCAGTGCCATAGTGTCCCGCAACGCAGACCCTGACCAACAAGGTGTGGTGCAGGGGATGATCACAGGAATTCGAGGACTATGTAACGGCCTGGGTCCTGCGCTCTACGGCTTCGTCTTCTACCTGTTTCACGTGGAGCTCAGTGAAATGGACCCCGCAGAGAGCCCAGAGAAGGGTGCCAAACCCAACATGGCCAACCCCACAGATGAGAGTGCCATCATCCCCGGCCCTCCTTTCCTGTTCGGAGCATGCTCGGTTTTGCTGTCCCTTCTGGTTGCTCTCTTCATCCCAGAGCACAATGCTCTCAACATGCGGCCCAGCAGCTACAAGAAGCACAACAACGGCGCGCAGAGCCACTTACACGGCTCTCAGGGCGGACCCTGCGAGGGAAAGGAGCCTCTGCTGGAGGACAGCAGCCTCGGCGAAGGCAGAACGAGCTGTGGGAACCGGTGCACGTATTACAAATTGAAAGACGCTTCTAGAGAAGAGCGTGTCGTCTTTTCGAACCCTCAAGGAAAACGTAACCAAGAAGGTCATTTCACACAGTCGTCGCTGTTGTATCATGCTCCTTCGAACTAGAGTTTCTGTTCTTGTACATCAGATGAAATAGTTTGTACTTCCTCTCCCTTGCTATCACGAGCGGTGTGTCAGAATTCATGCAGAGGGAGTAAAAGTTGCCTTTTAAGTGGCTTTTTATCACAATTACCAAACCCAGATGAAGACTACGCTCTGAGAAGGGTCAACCGTATCGCTCCTGTCGGAGCCTGCGCATATTTGATTTTCGTTCATCGTCTGCTTCGCCACCAGAACTCCCTGTGAACGTCAGCACTGCCACGATACAACAGGCTAGCAGGGTTACAAGCTTACTGACCGCATACCTAGTTTTCATATTATCGCAAGCACTGATGTGGGTGGAATAGCTTCGATGTGATTGGATGAGCATCGCTAGATCCAGTGAATCTAATATCACACATGCTGCTACTGTAGGGTGTACAAGGTTACAAAGTTCTGTGGTATAATACTATACTCTAAACGTGGTGTTTCTATTAGAGTTAAGCTTTTTCTGGCACGCCATTGTGATTTTAGACCCCAAATTTTGTGGCCGATTTCTATTTGCGGTGCTTAATTTTTTCTGGTGAGAAACTTTTTGAATACTTTTATCAGATCTCAACATTAACGTTCGATTTTTCCAGAGAAAACCTCAAGTGCATTCAGATCACTTTTTCTTTTAAACCGATCTCTGGGTTTTGTTTATTTGGTTTTAGGTGCCATACCTGACTTTATTTCTGTCTTTTGTGTGTTTTTATTCATTTGTGTGTTTCACTTTCTGGTATTTGTATGGTTTTCTTCTCTTTTTTTTTTTTATGTTGCTATTTTCAAGACAAATCCACAAGATGTTCCACAGCTTGTTTTTAGCTAACATTTTGGACCATTTATGTTTTCTTACAGCATTGAAAACCATGTAAATGTTATTTAAAGGTTTTTTCCATCATTTCACATTGAGCTGTATGACCAAACTTGAATGGAATTCTTTATCATATATTTTCATCCTGTTTTGTACCTGCATAATTACTCCTTTTCACTAGCCACTAAAAGAAATCTGGTGTTTGCCTCCGAAAAAAAAAGCCAATTAATTTGTGCCTAAAATGTGCTCTAAAAGAATAGAAACAGTTTATGTGAATGGTGATCCGGCTGTAAATATTAGGAACTAATGAGAAACTATTTATTAAA

Function

symbol description
mfsd14a Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to act upstream of or within acrosome assembly; sperm mitochondrion organization; and spermatid nucleus differentiation. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15561061_15573201.mRNA True 2889 mRNA 0.47 14 15559909 15573201

Neighbor

gene id symbol gene type direction distance location
CI01000004_15483948_15538159 INSR, INSRA coding downstream 21750 15483948 ~ 15538159 (-)
CI01000004_15456870_15468826 NA coding downstream 91083 15456503 ~ 15468826 (-)
CI01000004_15434959_15441538 DAPK3 coding downstream 118371 15434879 ~ 15441538 (-)
CI01000004_15429682_15430354 NA coding downstream 128860 15428518 ~ 15431049 (-)
CI01000004_15416876_15425066 NA coding downstream 134745 15416876 ~ 15425164 (-)
CI01000004_15581505_15586825 NA coding upstream 8189 15581390 ~ 15586825 (-)
CI01000004_15653837_15673610 NFATC4 coding upstream 80524 15653725 ~ 15673610 (-)
CI01000004_15702447_15708692 METTL17 coding upstream 129170 15702371 ~ 15708692 (-)
CI01000004_15726420_15733105 NA coding upstream 152851 15726052 ~ 15733105 (-)
CI01000004_15751774_15753519 NA coding upstream 178532 15751733 ~ 15755397 (-)
G34734 NA non-coding downstream 161132 15398571 ~ 15398777 (-)
G34733 NA non-coding downstream 161901 15397806 ~ 15398008 (-)
G34634 NA non-coding downstream 241687 15316241 ~ 15318222 (-)
G34611 NA non-coding downstream 267244 15286323 ~ 15292665 (-)
G34717 NA non-coding downstream 279767 15279943 ~ 15280142 (-)
G34768 NA non-coding upstream 103371 15676572 ~ 15682517 (-)
G34613 NA non-coding upstream 119889 15693090 ~ 15694289 (-)
G34595 NA non-coding upstream 123804 15697005 ~ 15700776 (-)
G34640 NA non-coding upstream 175448 15748649 ~ 15748929 (-)
G34608 NA non-coding upstream 190041 15763242 ~ 15765773 (-)
G34718 NA other downstream 278260 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 469551 15086671 ~ 15087575 (-)
G34668 NA other downstream 507134 15051176 ~ 15052775 (-)
G34632 NA other downstream 534688 15011361 ~ 15025221 (-)
CI01000004_14827536_14831360 NA other downstream 731786 14827496 ~ 14831526 (-)
G34633 NA other upstream 214185 15787386 ~ 15787897 (-)
CI01000004_15832789_15836192 NA other upstream 259372 15832573 ~ 15836231 (-)
G34796 NA other upstream 287412 15860613 ~ 15863748 (-)
G34934 NA other upstream 828544 16401745 ~ 16421506 (-)
G34982 NA other upstream 929524 16502725 ~ 16515974 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016659 hiat1a coding NC_007113.7 CM002886.2 37656078 ~ 37684641 (-)
bowfin (Amia calva) AMCG00005917 hiat1a,mfsd14a,LOC108413745,LOC107738165,LOC107659405,LOC102785602 coding CM030142.1 CM030142.1 12349245 ~ 12362876 (-)