kcnj3b (kcnj3b,LOC107688851,LOC107705606,LOC107566319,LOC107555453,LOC107660091,LOC108443434)


Basic Information

Item Value
gene id kcnj3b
gene name kcnj3b,LOC107688851,LOC107705606,LOC107566319,LOC107555453,LOC107660091,LOC108443434
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 5669451 ~ 5679904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240976.1
TCCAACACAAGAACACGTGTTCATCCCTCCCCCACCTCCCGTCTCCACCACCCTCTCGGAGAAGTTTCTCTTATTTGTCGGGGCTGGAGATGGAGTTGGAGAGCAGGAGGCGCGCAGTGCGCAGGAACCGAGGACAGTGAGAAGACGAGCAGAATCAGATAACAAAGCTCGCCAGCTGCGAGGAACAGCAGAGGCGGTGAGTTAAAACTTGGACAGGATCCTCAGGGCGTCTACCAACTACCATCTCATCAAATTGGCGCGATACACCTGGGGAAACAGGAGGAGTAGAtgaaggtggaggaggaggagggtgcCAACGCACAAGTGCTAGACTGCGCCAAGCCAATCTGAGATTACAAATTACTCGCATCCATTTTTCTCCACATTTCACAGCCTTGGCTGAGTGAGTCTTTTTTAGATATGCGGATTTGGAGAAGACAAAGAGACCCGCATCGCTCCATCCCAAGACCGACGCGCTGCTATTGACAAACTTACCCGCGGTAAGCcctaaaaataactttttttttttttttggaatcatCCGCCCCGGAGATGCGGGAGACTGGCGCATCCGAAGTGTGAAGAAAACCGAAAACAGTTTGTCAGGAACGAGCTCGTCAAGCATTCTCGCAGCCTATATCTGGGACAACTTTAACCGCGGAGGATGTCGGCGTTGCGGAAAAAATTTGGGGACGATTACCAAGTGGTGACCACTTCGTCCAGCGGCGGCGGGTTCAACCAGGCGGCCCCcgagaagaaaaagaaacgtCAGCGCTTTGTGGACAAGAACGGCCGCTGTAACGTCCAGCACGGGAACCTGGGAGGAGAGACCAGCCGGTACCTGTCCGACCTGTTCACCACGCTCGTGGATCTCAAATGGCGCTGGAATCTATTCATCTTCATCCTCACCTACACGGTGGCGTGGCTCTTCATGGCATCTATGTGGTGGGTCATTGCCTTTATACGCGGAGACCTGAACCAGGCCCACGATGACAAGTACACGCCGTGCGTGGCCAACGTGTACAACTTTCCCTCCGCTTTTCTGTTCTTCATCGAAACCGAGGCCACTATCGGATACGGTTACCGCTACATTACAGACAAGTGTCCGGAAGGcatcatcctcttcctcttccagTCCATCCTAGGCTCTATAGTGGACGCTTTTCTGATCGGTTGCATGTTTATCAAGATGTCCCAGCCGAAGAAACGCGCGGAGACGCTGATGTTCAGCGAGCACGCGGCTATTTCAATGCGTGACGGCAAACTGACCCTGATGTTCCGAGTGGGGAACCTGAGGAACAGCCATATGGTCTCCGCGCAAATACGCTGCAAACTGCTCAAATCCCGCCAGACTCCTGAAGGCGAGTTTTTGCCTCTGGACCAACTTGAGCTGGACGTCGGTTTCAGTACCGGAGCCGACCAGCTTTTCTTAGTGTCACCTCTGACGATCTGCCATGTGATCGACTCCAAGAGCCCGTTCTACGACCTCTCGCTCAGGTCCATGCAAACAGAGCAATTTGAGATCGTGGTTATCTTAGAGGGGATCGTGGAGACCACCGGTATGACATGCCAGGCTCGTACTTCGTACACGGAGGATGAGGTTTTGTGGGGTCACCGATTCTTCCCGGTAATTTCTCTGGAAGAGGGCTTCTTCAAGGTCGACTATTCGCAGTTTCATGGCACTTTTGAGGTTCCCACACCTCCGCACAGCGTTAAAGAACAAGAGGAGAGTTTGCTCCTGTCCTCGCCTCTGACGGCGCCCTCTCTGTGTCACAGTGCAGGTGGGGTGACGGAGGGCAGCGGCACTCTCGAAGGTCTGGAACTTCAGAGCGATGCAGAAACTGGCTCCATTAATATAGCAACCCCCATGCCAACCACCAAACTGCCTGCCAAACTTCAGAAGCTTACAGGACGGGAGGCCCCCATCCGGGACGGAATGCCCCGCAAGCTTCTGCGCATGAGTTCAGAGATCACCTACAACCTGGGGGACTTGCCCGTCAAACTGCAGCGAATCAGCTCGGCCCCGGGTGTGGCAGAAGAGCGGCTTCAGCCAATCAGTGCTATGCTGAGCTCCAATGAGGACAGACTGGCTCCCAAGCTGGGCTTGGTGGGCGGGGCTGAACCCATCAGCCAATCGGTGACAGATCTGCCACCGAAACTGCAAAGGTTGGCTGGAGGGGTCGGGGTGGGTGGAGTCGGAATCGGAGGACGAATGGATGGTCACCTGCCTCCCAAACTGAGAAAAATGAATTCAGAGAGGTTCACGGGCTTGAGTTTAAAATGAACAgacttctatatatatacacacacacggtttGCCCATTTACCTCCTCTGAAATTGAAATTAAGTAAAAGGGACAATCTATACTTATAGCAATTTATATATGgataaaatattagattaatGCTAATCCTCTGCACAATCTGGCATGTTTTTACCACAAACAGCATGAAAGGAGAATTCATTTTCAACATCTAATTGCAGATAATATAACAATACTCAGAACTATTTAACAAGTATTCAGTATATCTCTTTTATATTAGCCTAATAGCCAAACTTGTTTTGAGGGCTTGCCTATATTATGTATATCTTACGATAGAATATCAATTTAATTATCAGAATGCAATGTCAGTGTTCACTGATAATCCATGGTAACTAGTGTTTCTAAAGAAGCCAAACCTGAGTTagcaattagttttttttcatcagtgagAGATTAGTTACTGTGGTTTTTAGACTTCAAGAAATGGGCGCTGTGCATTTATGGAAATGTAacaaatttttggatgaaccgaCTCaggttttgttcttgttttctaATCTATTGCATGATCTATGATTTCATAATCAAGCCAGATTATCTCACGTCAAAGAATAAGCCTTAAATATAAAGAGCCAAATGTAAAATACCAAGCATCGTAGACAACTACTCTGgaaagcttttaaaaagtttgactTTTTACAGCTTTATTGAGCTATTTGTGGCAGAATACGTTTTTTCTCACAGCATTTCACATTTGGCTCTGACTTTATATATGATGTTTTGTCAATGATTGTTTCCTGCTGTTCTCCGTTTAGAAGTTTAAACTTAGTTGAAATGTTCAAATCTTTTCCTGACCTGAATGACTTGAGTATTGCAATGGATGAAGTGGGGGTGTACACCCGTCTAAGACAGAAAAGAGCACAATGGATGTGTATAtctgttttaatattctttatagATAAGACCTTGTCAACATTGTTATGGCTTTGTTTAACTCTTGTGTTTGAAAAACGAAGCAATAAGATTTGCAATTGCAGTGGAACTTCTGACTGGAAAAATCTTGTACCTTATGTTATGTTAGCGTTCgattgttttacagttttctaaTTGTGTTTCTCTCAATACATTCTATTCTACTTCTGACGAATATTAGAATGGCAGTTGGAGTGGtttataatactgtaataaatgtgttgtgACGTGTTACAAGTCTATTATAAAAGGAACGTGCTGAAGGACAAACCTCCACCTGATCCATCATCACAAAATAAGTCAGAAATGAATCGAAGCTATGGGTGGACTTGCCCATGTTTGACGCATATAAGCTCATTGGTATTGGCAGAGGTCTTCCCCACAAATAAAGCAGTTTGATCTGGTTTGA

Function

symbol description
kcnj3b Predicted to enable inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human KCNJ3 (potassium inwardly rectifying channel subfamily J member 3).

NR:

description
PREDICTED: G protein-activated inward rectifier potassium channel 1-like

GO: NA

KEGG:

id description
K04997 KCNJ3, KIR3.1; potassium inwardly-rectifying channel subfamily J member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240976.1 True 3645 mRNA 0.46 3 5669451 5679904

Neighbor

gene id symbol gene type direction distance location
eef1b2 eef1b2,LOC107688853,LOC107748554,LOC107705603,LOC107660090 coding downstream 20885 5646330 ~ 5648566 (-)
zdbf2 zdbf2,LOC107748555,LOC107688855,LOC107555446,LOC107660085,LOC107566316,LOC107705512 coding downstream 23508 5640280 ~ 5645943 (-)
LOC122346881 NA coding downstream 54027 5613345 ~ 5615424 (-)
tmbim1a tmbim1,LOC107688863,LOC107660079,LOC107584758,LOC107555406 coding downstream 77534 5584620 ~ 5591917 (-)
ical1 ical1,LOC107555443,LOC107705594,LOC107660076,LOC107688867,LOC107576608,LOC107748563 coding downstream 120513 5538054 ~ 5548938 (-)
fmnl2b fmnl2b,LOC107688848,LOC107660092,LOC107705607,LOC107566322 coding upstream 21118 5701022 ~ 5721647 (-)
LOC122346764 mylkb,LOC107748549,LOC107688847,LOC107555454,LOC107566310,LOC107705608,LOC107660138 coding upstream 77098 5757002 ~ 5770326 (-)
LOC122346765 LOC107748549,LOC107688847,LOC107555454 coding upstream 152080 5831984 ~ 5837061 (-)
chpfb LOC107748547,LOC107688915,LOC794660,LOC107705610 coding upstream 221234 5901138 ~ 5910744 (-)
cryba2a cryba2a,LOC107748546,LOC107566796,LOC107688845,LOC107566327,LOC107705612,LOC108437841 coding upstream 250426 5930330 ~ 5931637 (-)
G43019 NA non-coding downstream 14493 5654221 ~ 5654958 (-)
G42960 LOC107584764,LOC107677591,LOC107743335 non-coding downstream 430514 5139399 ~ 5238937 (-)
LOC122346705 NA non-coding downstream 430756 5236821 ~ 5238695 (-)
G42955 baz2b,LOC107677545 non-coding downstream 440480 5133802 ~ 5228971 (-)
LOC122346706 NA non-coding downstream 477452 5185601 ~ 5191999 (-)
LOC122346635 NA non-coding upstream 65535 5745439 ~ 5747394 (-)
LOC122346634 fmnl2,fmnl2a,LOC108273365,LOC108443439 non-coding upstream 67862 5747766 ~ 5755464 (-)
G43161 NA non-coding upstream 316052 5995956 ~ 6483393 (-)
G43173 NA non-coding upstream 338536 6018440 ~ 6023510 (-)
G43251 NA non-coding upstream 1135356 6815260 ~ 6823021 (-)
adam23a adam23,adam23a,LOC107748557,LOC107705602,LOC107660086,LOC107688856 other downstream 29525 5622686 ~ 5639926 (-)
G42958 LOC107742327 other downstream 438741 5229456 ~ 5230710 (-)
sumo3a sumo3a,sumo3b,LOC103392195,LOC107668404,LOC108430868 other downstream 783102 4882787 ~ 4886349 (-)
LOC122347558 cycsb,LOC103040542,LOC108273362,LOC108430847 other downstream 843985 4818191 ~ 4825466 (-)
gpr155b gpr155b,LOC107740589,LOC107581372,LOC107584777,LOC107705544,LOC107677583,LOC107660045 other downstream 894905 4766381 ~ 4774546 (-)
arl6ip6 LOC107688850,LOC107748576,LOC107705609,LOC107660093,LOC107566311,LOC107555419 other upstream 11577 5691481 ~ 5699650 (-)
mylkb mylkb,LOC107688847,LOC107748549,LOC107555454,LOC107705608,LOC107566310,LOC107660138 other upstream 43564 5723468 ~ 5736620 (-)
desmb desmb,LOC107566324,LOC107660100,LOC107705613,LOC107688844,LOC107566784,LOC107748575 other upstream 278889 5958793 ~ 5966604 (-)
cacnb4b cacnb4b,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 other upstream 361972 6041876 ~ 6524950 (-)
G43180 nck2b,LOC107688832,LOC107748532,LOC107660111,LOC107738306 other upstream 593419 6273323 ~ 6301137 (-)

Expression


Co-expression Network