myl9b (myl9b,myl9,LOC107690817,LOC107582309,LOC107554878,LOC107666694)


Basic Information

Item Value
gene id myl9b
gene name myl9b,myl9,LOC107690817,LOC107582309,LOC107554878,LOC107666694
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 447872 ~ 452581 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241854.1
AGACCTCTGATTGGCCGAAAGTAACATGGGAGGGGTGCATTTCTCAAGCTCACGCTCTGGAGAAACTTTTGTGTCCCGAAAGTGCAGAAGACAGCCTTAATTTCCAGGAACAAAGACACAGTTCAGCGGACAGCACAGTCCATCAGCTGCAGGAGAGACCTCAAACACCGCCATCATGTCCAGCAAGCGAGCGAAGGGAAAGACCACTAAGAAGAGGCCGCAGAGAGCCACTTCAAACGTGTTCGCCATGTTTGACCAGTCACAGATCCAGGAGTTCAAGGAGGCCTTCAACATGATCGACCAGAACCGAGACGGATTCATCGATAAAGAGGACCTCCACGACATGCTGGCCTCTTTGGGGAAGAACCCGTCTGATGATTATCTGGAGGGGATGATGAGCGAAGCTCCGGGGCCCATCAACTTCACCATGTTCCTCACCATGTTCGGAGAGCGGCTGAACGGAACCGACCCGGAGGACGTCATCAGGAACGCTCTCGCCTGCTTCGACGAGGAAGGATCcgGTTTCATTCACGAAGACCACCTGCGAGAGCTTCTGACCACCATGGGAGATCGTTTCACAGATGAAGAGGTGGACGAGCTCTTCAGAGAGGCTCCCATCGACAAAAAGGGAAACTTCAACTACGGCGAATTCACCCGGATCCTCAAACACGGGGCCAAAGACAAAGACGACATGTAGACGACCAGCGGGCAGCTGCACAGAGCGTTACAGACACATCAAGAAAAACACGTCTCAcgtcagaaatgtttcttagtCTGCGAGTATTTTTCTCTAAATGCATTCGATACAACCAGATCGCATTGTAAATAACGTTGTGCGTTTTCATGGGGGGGCTACAGTATGTCCGAGCAGGTTAAAGCAAAGCTAAAACGTCCGAGTTCAGAATCTATGCAACTCTTGAAATAAAACTAGTACATTGGAGCTGCCCAGAGGTTATTtttgaatgtgtatttaaaagGATTATTGAAAAGGATAAAGGATCTCCCCCTCACCGAGCAAAAACATTGTAGTCGTTATAATGGAAGTAAAGCATGACCGATTGCATTTTTCACACCCATAATTGAGACAGACTTTGGGATTTGTTTGGTGGTACCGCTACTTGTGTTTTCCCATTAAACCCTGTGAATATCTGGCTTATAAAACGTGCATTTACACGCGGCAGCTCTCAGGCATGAAGTCATCCATCGTGATGCATTTTATACTGAATAAAGATGGCCTTAAACTTCA

Function

symbol description
myl9b Predicted to enable calcium ion binding activity. Is expressed in smooth muscle cell. Human ortholog(s) of this gene implicated in familial hypertrophic cardiomyopathy. Orthologous to human MYL9 (myosin light chain 9).
myl9 Predicted to be a structural constituent of muscle. Involved in platelet aggregation. Predicted to be located in cytosol. Predicted to be part of myosin II complex. Implicated in familial hypertrophic cardiomyopathy.

NR:

description
PREDICTED: myosin regulatory light polypeptide 9

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12755 MYL9; myosin regulatory light chain 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241854.1 True 1246 mRNA 0.48 4 447872 452581

Neighbor

gene id symbol gene type direction distance location
quo LOC107752865,LOC107705889,LOC107554860,LOC107686788,LOC107690824 coding downstream 130961 583542 ~ 612610 (+)
tgm2b tgm2b,LOC107686772,LOC107582311,LOC107705888,LOC107690815,LOC107554881 coding downstream 161012 613593 ~ 626807 (+)
acvr1bb acvr1bb,LOC107690814,LOC107554883,LOC107686786,LOC108427611,LOC108271957,LOC107752870,LOC107708570 coding downstream 232096 684677 ~ 700851 (+)
LOC122346748 rgsl1,LOC107752871 coding downstream 258559 711140 ~ 719351 (+)
pbx1b pbx1b,LOC107686770,LOC107690813,LOC108272157,LOC108239658,LOC106534379,LOC107708575,LOC104918287,LOC103479586 coding downstream 323035 775616 ~ 849114 (+)
G41399 LOC107752863,LOC107666669 non-coding upstream 6676 440483 ~ 441196 (+)
G41397 NA non-coding upstream 25754 420631 ~ 422118 (+)
G41361 NA non-coding upstream 34298 409185 ~ 413574 (+)
G41379 plxna1b,plxna1,LOC107666667,LOC107582336 non-coding upstream 160087 280218 ~ 287785 (+)
G41358 NA non-coding upstream 219356 227558 ~ 228516 (+)
G41406 LOC107705865,LOC107554879,LOC107690825,LOC107582307,LOC107666670 non-coding downstream 9331 461912 ~ 468971 (+)
G41422 NA non-coding downstream 179078 631659 ~ 640292 (+)
G41429 tgm5l,LOC107554861,LOC107690823,LOC107708569,LOC107686787,LOC107582312,LOC107752867 non-coding downstream 208918 661499 ~ 676170 (+)
G41519 med8,LOC107686783,LOC107708572,LOC107690829,LOC107554872 non-coding downstream 403367 855948 ~ 856341 (+)
G41523 NA non-coding downstream 437654 890235 ~ 890883 (+)
LOC122346742 quo,LOC107752865,LOC107686788,LOC107690824,LOC107705889 other upstream 290349 155245 ~ 157523 (+)
LOC122346741 LOC107742012,LOC107692219,LOC107569440,LOC107550133 other upstream 294663 147702 ~ 153209 (+)
kdm4aa kdm4a,LOC107709085 other downstream 993109 1445690 ~ 1460615 (+)
col28a2b LOC107746616,LOC107686762,LOC107672681,LOC107709063,LOC107557124,LOC108438056 other downstream 1145273 1597854 ~ 1617541 (+)
rbm26 rbm26,LOC107690205,LOC107746592,LOC107672672,LOC107582359,LOC107557133 other downstream 1466729 1919310 ~ 1949218 (+)
LOC122346848 pcdh9,LOC107582331 other downstream 1695799 2148380 ~ 2390459 (+)
LOC122346757 sumo3a,sumo3,LOC108430868,LOC108273059 other downstream 2321932 2774513 ~ 2776627 (+)

Expression


Co-expression Network