LOC122346742 (quo,LOC107752865,LOC107686788,LOC107690824,LOC107705889)


Basic Information

Item Value
gene id LOC122346742
gene name quo,LOC107752865,LOC107686788,LOC107690824,LOC107705889
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 155245 ~ 157523 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU61183
CCAGCTGATCCGTCAGGACGAGTTCCTGCTGACCTTCAGGAAGAAGAAATGCTACCGTCACATCTTTCTCTTCCAAGACCTCATACTCTTCAGCAAGACGCGCAGAACCGATGTTGGCAGTGACACGTACATCTACAAGCAGTCCTTCAAGACCTCAGACGTCGGCATGACCCACAACTCGGGAGACAGCGGGCTGTGTTTCGAGATCTGGTTTCGAAGGAGGAAGTCTCAGGACACGTACGTCCTTCAGGCAGCGAGTCGAGACGTGAAGGAGAGCTGGACCAGAGACCTGGAGCGGATCCTGTGGGAACAAGCTGTCCACAACAGAGAGGTCCGTATGCAGGAGAGGGTGTTCATGGGAATCGGTCATAAACCCTTCATGGACATCCAGCCCAGTGAGATGGCCATCAATGACCGAGCCATCAACTGTTCTCCCACGGGACGAGTAGGTGGGATTCCTGTCCTCCGGCTAAATTCTGTCGGCTCGGCCAGCTGTACGTCATCCTCTGGAAGCCGTTCGTCGTCGTCGTCCGGCTGGGGATCTCCTCCTCCCGTGGGTCAGCTGATCGGCCCTAACGGAGATGTTGTCCGGTACGTCCATGGGACTTCAGGGATCCTGGAGGAAGATGATTTAGACCAGGAGAGCGTAAACCAGA
>XM_043241593.1
aaaatgtatttcaacatTTGGACCAGTAGTATAGATATAAAAGGTTTTCAGGGTCTCTCGAAACGAACTTGATGATGTTTTGGTTGTTGTTAAAGCAAAAGCAGAATGCAAAAGCGGTCGATTCATATAAAAGTAgttgtaaatgttgttttgttcgTGCGCGTGCAGGTGAATCTGAAGGAACAGGGCCAGCTGATCCGTCAGGACGAGTTCCTGCTGACCTTCAGGAAGAAGAAATGCTACCGTCACATCTTTCTCTTCCAAGACCTCATACTCTTCAGCAAGACGCGCAGAACCGATGTTGGCAGTGACACGTACATCTACAAGCAGTCCTTCAAGACCTCAGACGTCGGCATGACCCACAACTCGGGAGACAGCGGGCTGTGTTTCGAGATCTGGTTTCGAAGGAGGAAGTCTCAGGACACGTACGTCCTTCAGGCAGCGAGTCGAGACGTGAAGGAGAGCTGGACCAGAGACCTGGAGCGGATCCTGTGGGAACAAGCTGTCCACAACAGAGAGGTCCGTATGCAGGAGAGGGTGTTCATGGGAATCGGTCATAAACCCTTCATGGACATCCAGCCCAGTGAGATGGCCATCAATGACCGAGCCATCAACTGTTCTCCCACGGGACGAGGTGGGATTCCTGTCCTCCGGCTAAATTCTGTCGGCTCGGCCAGCTGTACGTCATCCTCTGGAAGCCGTTCGTCGTCGTCGTCCGGCTGGGGATCTCCTCCTCCCGTGGGTCAGCTGATCGGCCCTAACGGAGATGTTGTCCGGTACGTCCATGGGACTTCAGGGATCCTGGAGGAAGATGATTTAGACCAGGAGAGCGTAAACCAGAGTACACTGGGTATGTCCTTCTTCACAAAATAA

Function

symbol description
quo Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within animal organ morphogenesis and mesoderm morphogenesis. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; forerunner cell group; mesoderm; and nervous system. Orthologous to human KIAA1755 (KIAA1755).

NR:

description
PREDICTED: uncharacterized protein KIAA1755-like

GO:

id name namespace
GO:0009887 animal organ morphogenesis biological_process
GO:0048332 mesoderm morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61183 False 656 TUCP 0.56 4 155433 157491
XM_043241593.1 True 873 mRNA 0.51 4 155245 157523

Neighbor

gene id symbol gene type direction distance location
myl9b myl9b,myl9,LOC107690817,LOC107582309,LOC107554878,LOC107666694 coding downstream 290349 447872 ~ 452581 (+)
quo LOC107752865,LOC107705889,LOC107554860,LOC107686788,LOC107690824 coding downstream 426019 583542 ~ 612610 (+)
tgm2b tgm2b,LOC107686772,LOC107582311,LOC107705888,LOC107690815,LOC107554881 coding downstream 456070 613593 ~ 626807 (+)
acvr1bb acvr1bb,LOC107690814,LOC107554883,LOC107686786,LOC108427611,LOC108271957,LOC107752870,LOC107708570 coding downstream 527154 684677 ~ 700851 (+)
LOC122346748 rgsl1,LOC107752871 coding downstream 553617 711140 ~ 719351 (+)
trnaq-uug_13 NA non-coding upstream 81527 73647 ~ 73718 (+)
LOC122347623 NA non-coding upstream 83567 70887 ~ 71678 (+)
G41331 NA non-coding upstream 98171 56393 ~ 57074 (+)
G41358 NA non-coding downstream 70035 227558 ~ 228516 (+)
G41379 plxna1b,plxna1,LOC107666667,LOC107582336 non-coding downstream 122695 280218 ~ 287785 (+)
G41361 NA non-coding downstream 251662 409185 ~ 413574 (+)
G41397 NA non-coding downstream 263108 420631 ~ 422118 (+)
G41399 LOC107752863,LOC107666669 non-coding downstream 282960 440483 ~ 441196 (+)
LOC122346741 LOC107742012,LOC107692219,LOC107569440,LOC107550133 other upstream 2036 147702 ~ 153209 (+)
kdm4aa kdm4a,LOC107709085 other downstream 1288167 1445690 ~ 1460615 (+)
col28a2b LOC107746616,LOC107686762,LOC107672681,LOC107709063,LOC107557124,LOC108438056 other downstream 1440331 1597854 ~ 1617541 (+)
rbm26 rbm26,LOC107690205,LOC107746592,LOC107672672,LOC107582359,LOC107557133 other downstream 1761787 1919310 ~ 1949218 (+)
LOC122346848 pcdh9,LOC107582331 other downstream 1990857 2148380 ~ 2390459 (+)
LOC122346757 sumo3a,sumo3,LOC108430868,LOC108273059 other downstream 2616990 2774513 ~ 2776627 (+)

Expression


Co-expression Network