Fish Transcriptome and Expression Database

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ornamental fish

trnaq-uug_13

Basic Information

Item	Value
gene id	trnaq-uug_13
gene name	NA
gene type	non-coding
species	tiger barb (Puntius tetrazona)
category of species	ornamental fish

Chromosome Information

Item	Value
chromosome id	NC_056704.1
NCBI id	CM032073.1
chromosome length	27473687
location	73647 ~ 73718 (+)
genome version	ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1082
GGTcccatggtgtaatggttagcactctggactttgaatccagcgatccgagttcaaatctcggtgggacct

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
unassigned_transcript_1082	True	72	tRNA	0.51	1	73647	73718

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
myl9b	myl9b,myl9,LOC107690817,LOC107582309,LOC107554878,LOC107666694	coding	downstream	374154	447872 ~ 452581 (+)
quo	LOC107752865,LOC107705889,LOC107554860,LOC107686788,LOC107690824	coding	downstream	509824	583542 ~ 612610 (+)
tgm2b	tgm2b,LOC107686772,LOC107582311,LOC107705888,LOC107690815,LOC107554881	coding	downstream	539875	613593 ~ 626807 (+)
acvr1bb	acvr1bb,LOC107690814,LOC107554883,LOC107686786,LOC108427611,LOC108271957,LOC107752870,LOC107708570	coding	downstream	610959	684677 ~ 700851 (+)
LOC122346748	rgsl1,LOC107752871	coding	downstream	637422	711140 ~ 719351 (+)
LOC122347623	NA	non-coding	upstream	1969	70887 ~ 71678 (+)
G41331	NA	non-coding	upstream	16573	56393 ~ 57074 (+)
G41358	NA	non-coding	downstream	153840	227558 ~ 228516 (+)
G41379	plxna1b,plxna1,LOC107666667,LOC107582336	non-coding	downstream	206500	280218 ~ 287785 (+)
G41361	NA	non-coding	downstream	335467	409185 ~ 413574 (+)
G41397	NA	non-coding	downstream	346913	420631 ~ 422118 (+)
G41399	LOC107752863,LOC107666669	non-coding	downstream	366765	440483 ~ 441196 (+)
LOC122346741	LOC107742012,LOC107692219,LOC107569440,LOC107550133	other	downstream	73984	147702 ~ 153209 (+)
LOC122346742	quo,LOC107752865,LOC107686788,LOC107690824,LOC107705889	other	downstream	81527	155245 ~ 157523 (+)
kdm4aa	kdm4a,LOC107709085	other	downstream	1371972	1445690 ~ 1460615 (+)
col28a2b	LOC107746616,LOC107686762,LOC107672681,LOC107709063,LOC107557124,LOC108438056	other	downstream	1524136	1597854 ~ 1617541 (+)
rbm26	rbm26,LOC107690205,LOC107746592,LOC107672672,LOC107582359,LOC107557133	other	downstream	1845592	1919310 ~ 1949218 (+)

Expression

Co-expression Network