G26416


Basic Information

Item Value
gene id G26416
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3840832 ~ 3842544 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU29806
GAAAGAAAGAAAGAAAGAAAGAAAGACTAATGAAAAATAAGCTAATGAAAAAAGAAATATTGAATGAAAAGAAAACAAAAATAAAGAGCTTAATGAACAGAAGCAAACTAAGAAAAAATGAAAGATAGAAAGGATGAAAGAGTGAAACAGAAGAAAGAGAACAGGAGAGAAAGAAGGGTTGAAAGGAGGAAAGAAAGAACAAAAATTAAGAACAGAAAAGAACATACAAGCAAACAAACAAACACCCAAAACAAAGACTAAAATAGTGAAAGAAAGAACAACTGAATGAAAAAAAGGGGGAAAAAAAGAATGAACAAAAGAACAAGCAAATGAAGCAAGAAAGGACAGAAAAGTACAAACAAGTACAAACAACCAATAAAAACAGCAAACAAACAAAAGGCTTAAAACTTGAAATAGTGGAAGAAAGAACAAAAAAAACAACAACAACAGAACAAGCAAATGAATAAATGAACAAAGGAAAGTTAGGGTGAAAGAGCGAAAAAGGAAGCGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGATAAAAGGAAAGTAAGAAAAAGAAAAGGAAAGAAAGAAAAATACAAGGAGAGGAAGAAAGACTAATAAAAAAGCAGCTAATGAAAAAATAAATATTGAATGAAAAAAAGAAGAATGAACAGAAGCAAACTAAGAAATGAACAATAGAAAGGATGAAAGAGTGAAACAGAAGAAAGAGAACAGGAGAGAAAGAAGGGTTGAAAGCAAGAAAGTACAGAAAAGTACAAACCACCAATCAAAACAGCAAACAAACAAAAGGCTCAAAACTTGAAAAAGAACAATCTAACAAAAACAACAACAGAACAAGCGAATGAATAAATGAACAAAGGAAAGATAGGGTGAAAGAGCGGAAGAAAGAAAGAGCAAAAGAAAGAGAAAGCGAAAGAAAGAATGAGCGAAAGAAAGAAAATTACAAATGAGTAAACGAACAAACACTGTAAAAATGGATTTTTCGAAGTCGTAAATAAGACAGATTGAGTACGATTTACGTTTTATTTCAGTCAGTCTACTTCAAAATTTCACATTTCATTAAATGTTAGCCCACTTGCAGATTCTTACTAGCAAGTGTGATTTGAGAGATTTACTTTTAGTGAAAGAGCAAACAAACAAGACTCAAAACAAAGGTTTTTACACTTAATTCTAAAAATAGAAAGGTCATAGTATTAAACCTGTATATTTCCAGGACAGAAGAGACTGCCACGCACTGATTCCCACACAGAGCTCCCTTTAATATCCTAATCTGACACAGTGATGCTTATTAGATTACAGTGTACCTCAGTGGAACATTTTTAATCCCTGCACGGGTAATGCAGCACTAAAATGCCATATACAAATGATGAAACACATGAGAAACATCCTATGCACTCTATTGAATTTACCGCATAATGTTTACAAATGACACAGAGCTTGGGCTACGAATAATCATTATCCATCACTTAAGGACCAGGTTATATTGTAACTCTGTCACTGTCTACTTTTATCCTACATACTTGTTTTCATTTCCCAGATAATTATATAGATGCATAACATTCCATTTGTGCATGTAGATTAAATATCCACTTGACATAATTAATAGTCTCCAATCTTTCAAAATGACAGTATCTACTATAGCCTACATGCCAACTCCAATAGCTTTAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29806 True 1681 lncRNA 0.32 2 3840832 3842544

Neighbor

gene id symbol gene type direction distance location
CI01000004_03814120_03839793 NA coding upstream 1025 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 103815 3735754 ~ 3737017 (+)
CI01000004_03592655_03592917 NA coding upstream 247915 3592655 ~ 3592917 (+)
CI01000004_03550525_03552621 PTGER4C coding upstream 287409 3550329 ~ 3553423 (+)
CI01000004_03504401_03504700 NA coding upstream 335900 3504278 ~ 3504932 (+)
CI01000004_03878083_03909016 NA coding downstream 35475 3878019 ~ 3909309 (+)
CI01000004_03934726_03935639 NA coding downstream 91141 3933685 ~ 3935870 (+)
CI01000004_04048829_04053849 NA coding downstream 203384 4045928 ~ 4054570 (+)
CI01000004_04123289_04123846 NA coding downstream 280080 4122624 ~ 4123963 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 329110 4171654 ~ 4174352 (+)
G26390 NA non-coding upstream 37988 3800910 ~ 3802844 (+)
G26362 NA non-coding upstream 138198 3702156 ~ 3702634 (+)
G26244 NA non-coding upstream 159474 3679721 ~ 3681358 (+)
G26263 NA non-coding upstream 164087 3676403 ~ 3676745 (+)
G26359 NA non-coding upstream 167585 3673032 ~ 3673247 (+)
G26492 NA non-coding downstream 99287 3941831 ~ 3942173 (+)
G26493 NA non-coding downstream 99749 3942293 ~ 3943340 (+)
G26498 NA non-coding downstream 106340 3948884 ~ 3949306 (+)
G26504 NA non-coding downstream 109991 3952535 ~ 3952818 (+)
G26508 NA non-coding downstream 114980 3957524 ~ 3957749 (+)
G26245 NA other upstream 318439 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1081894 2745885 ~ 2769135 (+)
G25992 NA other upstream 1104064 2736536 ~ 2736768 (+)
G25882 NA other upstream 1267783 2548075 ~ 2573049 (+)
G27805 NA other downstream 1530281 5372825 ~ 5373803 (+)
G28165 NA other downstream 1890045 5732589 ~ 5733001 (+)
G28302 NA other downstream 2627484 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2728676 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3812228 7654234 ~ 7656383 (+)

Expression


Co-expression Network