G26493


Basic Information

Item Value
gene id G26493
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3942293 ~ 3943340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU29884
CGGGAACACCCCACAAGAGTTTGCAGTTTTGGAGATGATCTGACCCAGTCGTCTAGCCATCATTTTTCCTGCTTCTAAAGCCCTGGATACACTGCACGATTTTAGCAATCCTATAAGATCATTACTTTATCACACTGTGCGACATGGATCTACTAAACTTGGGTACGACATAAATGTAGACTGTACGATCATGACACCTATTGACTCGTAGGCTACGATGCAAGTTTTTATAAAAGAATAAAACGTCATCAGCATGCGCTACTGGTAAACAAAACACTATGTTGAATCACACTTTGGCAGTTGTAGTTTTTATGTGTGCTGAAAATAAAAAGGAAGCAGCGAAAGAAGAAGGGAAAAGAGCTTGAGGTAAGCAGTTTTAAGTTTTAGCGCCATGTCCCGTTGATCTCATGTCGCATTTTTATTGGCTGGTCAGTAGACGTAGGTCATAGCAGCAAACACATTGTGCGTTGATCAGGCTGAATTTCTGACACTGTCAGAAAATGATCGTAGGCTATCTTTGGTCGCAAGACCGGGAAAACGGCCGTCTTTGAACCTCTCTCACTGTACAACATAGGACCACCGATTAAGAGCCACGATCACTGAAATCGGCACGATTGTTTCACGATGCCAATCTTTCGTCTGGGACAGCCAAAAATCGTGCAGTTTATCCCGGGCTTAACACATCAACTTTGAGGACAAAATGTTCACTTGCTGCCTAATATATCCCAGCCACTAACAGGTGCCGTGATGAAGAGATAATCAGTGTTATTCACTTCACCTGTCAGTGGTCATAATGTTATGCCTGATTGGTTTATATATTTCACTTGCTTGCTTGATTACAACAAGCTGAAATAGCTCTTTTTGACCAAAGCTTTTACTGTCCATTTTGGACGTTTTCACCTAACTTCAGTGCAGTTCAGGAGAAACATTTTGATTCTACTCGACCTATGCGCTGCATTTGACACTGGTTTGGATTTGAGGTCAGACAAAGTTAAGAGGCACTGATCTCTATCAACACTGCAAGATTTTTATATAGCACACACAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29884 True 1048 lncRNA 0.50 1 3942293 3943340

Neighbor

gene id symbol gene type direction distance location
CI01000004_03934726_03935639 NA coding upstream 6423 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 32984 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 102486 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 205276 3735754 ~ 3737017 (+)
CI01000004_03592655_03592917 NA coding upstream 349376 3592655 ~ 3592917 (+)
CI01000004_04048829_04053849 NA coding downstream 102588 4045928 ~ 4054570 (+)
CI01000004_04123289_04123846 NA coding downstream 179284 4122624 ~ 4123963 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 228314 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 287871 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 371436 4314776 ~ 4317616 (+)
G26492 NA non-coding upstream 120 3941831 ~ 3942173 (+)
G26416 NA non-coding upstream 99749 3840832 ~ 3842544 (+)
G26390 NA non-coding upstream 139449 3800910 ~ 3802844 (+)
G26362 NA non-coding upstream 239659 3702156 ~ 3702634 (+)
G26244 NA non-coding upstream 260935 3679721 ~ 3681358 (+)
G26498 NA non-coding downstream 5544 3948884 ~ 3949306 (+)
G26504 NA non-coding downstream 9195 3952535 ~ 3952818 (+)
G26508 NA non-coding downstream 14184 3957524 ~ 3957749 (+)
G26513 NA non-coding downstream 16979 3960319 ~ 3960541 (+)
G26517 NA non-coding downstream 20209 3963549 ~ 3963839 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 389847 3550329 ~ 3553423 (+)
G26245 NA other upstream 419900 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1183355 2745885 ~ 2769135 (+)
G25992 NA other upstream 1205525 2736536 ~ 2736768 (+)
G25882 NA other upstream 1369244 2548075 ~ 2573049 (+)
G27805 NA other downstream 1429485 5372825 ~ 5373803 (+)
G28165 NA other downstream 1789249 5732589 ~ 5733001 (+)
G28302 NA other downstream 2526688 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2627880 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3711432 7654234 ~ 7656383 (+)

Expression


Co-expression Network