G27148


Basic Information

Item Value
gene id G27148
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4991403 ~ 5116579 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30645
GACAGCTGGTAGATGAGCTCAGTGCGCATTGATTAAACCAACGCACATCTTATTTATCACAAAAGTACCAAACACACATAATTCTTCGCTTCTCGAGCACCTGTTCTTCCCACATGGGACACAACAAGAGCACAGAATTGAAAATCCGCCTCTGCACGCAAAAGATCAAGATCTTAAGGTTCTGCCTGGTTAAGGCTGGCACACATGCATTAAGTATTTCAGGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCTAGAGCACAAGTGAATATTATAGGCTTCTGATAACAGTGACTGTAGCTACATTCACAGTACGCACTATGGTAGCTAGTTTAACAGTATATCTCTCAATAGAAATACAAACTAAAATTTTCTCTCATATTGTAACTTTCTTTAAAGAAAAGATTCTTACCAGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCCACCAGTTAGAGAATGCCTGTCCATTTACAACATTACGGAAGATCACCATGTTTTGATCTGACGCCATCTGTGCTCACAAACCCAGCCATCTCCGCAGGTAGAGTCAGCGTTGATGGGAACAGGTTTGGTGGTCCCATCACTATAGCTGGGAGGTCCAATCCAGTCATTTTGACCTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTAGAACATGAAGGATGACTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCTTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAATAACCTCTTGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTTCTCACCTGCCATCATCACAATGCTCAGATGTGTAACACCAAGACAACAAGAGACCACACTGCACAATAAATCAGAGGTTGAAATAAACACTCAGACATCATATCTTCTCATACTTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTCACCTACAAAATCAAACCGAAGTGAATTTTCCATGAGAATAATACAACAATAGGCTAGCTGTGCTCTATTTGTCAATTATGGCTGCATTTACCCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGATCTGAATCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA
>TU30646
GACAGCTGGTAGATGAGCTCAGTGCGCATTGATTAAACCAACGCACATCTTATTTATCACAAAAGTACCAAACACACATAATTCTTCGCTTCTCGAGCACCTGTTCTTCCCACATGGGACACAACAAGAGCACAGAATTGAAAATCCGCCTCTGCACGCAAAAGATCAAGATCTTAAGGTTCTGCCTGGTTAAGGCTGGCACACATGCATTAAGTATTTCAGGCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCTAGAGCACAAGTGAATATTATAGGCTTCTGATAACAGTGACTGTAGCTACATTCACAGTACGCACTATGGTAGCTAGTTTAACAGTATATCTCTCAATAGAAATACAAACTAAAATTTTCTCTCATATTGTAACTTTCTTTAAAGAAAAGATTCTTACCAGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCCACCAGTTAGAGAATGCCTGTCCATTTACAACATTACGGAAGATCACCATGTTTGATCTGACGCCATCTGTGCTCACAAACCCAGCCATCTCCGCAGGTAGAGTCAGCGTTGATGGGAACAGGTTTGGTGGTCCCATCACTATAGCTGGGAGGTCCAATCCAGTCATTTTGGTCTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTAGAACATGAAGGATGACTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCTTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAACCTCTTGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTTCTCACCTGCCATCATCACAATGCTCAGATGTGTAACACCAAGACAACAAGAGACCACACTGCACAATAAATCAGAGGTTGAAATAAACACTCAGACATCATATCTTCTCATACTTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTCACCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGATCTGAAATGGGAAAATCAATATTTCGTTATCACTATTATACATTTTTACTCCTATAAATCACAAAACAAAACAAAAAAATTATAAACTGCAAATGAACTTTTTGCAGTATTAACTACAATGATGTGTTTAAAAAATACCTGAACTCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA
>TU30643
TTTTTTTGTTTTTGTTTTTTTAACTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTAGAACATGAAGGATGACTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAATAACCTATGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTTCTCACCTGCCATCATCACAATGCTCAGATGTGTAACACCAAGACAACAAGAGACCACACTGCACAATAAATCAGAGGTTGAAATAAACACTCAGACATCATATCTTCTCATACTTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTCACCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGCTGAACTCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA
>TU30647
CACGCACAGCTCACACTAGCCTATGTGCCAATAAAATCCAGGATGCCAATAAAATAAACCATCCACTTGTTTCTGACACTGGGATCCTTCTGAAGTCTTTACAGAGATACAATTTTAAGTCTAGCTGTTTAAACTAGATGCGTCTATGTGATTATAATGGGCTCTATTTGCTTTTGATTCAATGCAAAATGTCAGCCGTTAAGCAACTGATTGCCAGTGGGCGGGGCCTATGGTAGGATGATGTTTAACTATTTGTCGATGTCTTGCTCTGGAGGCGGTCACATGCAAATATATTTGCCCGTGTGATGTCACAGATCCGACGTCATGACCCCTTTAACATGTATCTGTCTCTATCATGTAATCGTTTTTTTTTTTTTTTTTTTTTTTAACTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCTAGAGCACAAGTGAATATTATAGGCTTCTGATAACAGTGACTGTAGCTACATTCACAGTACGCACTATGGTAGCTAGTTTAACAGTATATCTCTCAATAGAAATACAAACTAAAATTTTCTCTCATATTGTAACTTTCTTTAAAGAAAAGATTCTTACCAGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCCACCAGTTAGAGAATGCCTGTCCATTTACAACATTACGGAAGATCACCATGTTTTGATCTGACGCCATCTGTGCTCACAAACCCAGCCATCTCCGCAGGTAGAGTCAGCGTTGATGGGAACAGGTTTGGTGGTCCCATCACTATAGCTGGGAGGTCCAATCCAGTCATTTTGACCTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTAGAACATGAAGGATGATTACAAGTGAAAGGAAATGTTATGTTTTCATTTGCCACACATATGTTGCGTTGTAAATTAAAATAAGATAAAGTTGTACCTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCCTTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAATAACCTAATAACATACCGAATGACAAGTAAATAGCTATTAAATATTATTTTGCCACCTTTACACTGATGTTCCTTTTGTAAATTAATGGAAATACCTCTTGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTCATACTTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTACCCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGCTGAACTCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA
>TU30642
ATTTTCTAGTTCTTAATGATGAATAATACACCTTTTCTAAAGATGTTGCAAATATCGATGAACTATAAATATCATTTTTGCAACTTAAGCCAACAGGATGAAACCATGTAAAAAATGACAATAGTTATAACTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCTAGAGCACAAGTGAATATTATAGGCTTCTGATAACAGTGACTGTAGCTACATTCACAGTACGCACTATGGTAGCTAGTTTAACAGTATATCTCTCAATAGAAATACAAACTAAAATTTTCTCTCATATTGTAACTTTCTTTAAAGAAAAGATTCTTACCAGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCCACCAGTTAGAGAATGCCTGTCCATTTACAACATTACGGAAGATCACCATGTTTTTGATCTGACGCCATCTGTGCTCACAAACCCAGCCATCTCCGCAGGTAGAGTCAGCGTTGATGGGAACAGGTTTGGTGGTCCCATCACTATAGCTGGGAGGTCCAATCCAGTCATTTTGGTCCTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAATAACTCTTGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTTCTCACTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTCACCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGCTGAACTCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA
>TU30644
ATTTTCTAGTTCTTAATGATGAATAATACACCTTTTCTAAAGATGTTGCAAATATCGATGAACTATAAATATCATTTTTGCAACTTAAGCCAACAGGATGAAACCATGTAAAAAATGACAATAGTTATAACTTGCGTGCAGCTTATTTATTTAAATAGCATCATTTAAAGTTTTGAGTCTGCGTGAATGGCAATAAATGGGTCTTCTTCCTGGTTACTGATTCTGAAGTAAGCTCTTCCATCTCCTCCAACCGTCACCTCTTTCCCAGTGCATCTGCCATTTTCCTTCTGACCAGAGATCACATCACAGTAGGTGCCTCCCGGCAGGCCAGTGGTCAGGGTCTCATTCAGCTCCCGTCATCATTGTTGATGACAAGGAACCCTCGATTACCACGGCTGAAAGAGATCTGGTTGCTTCCATTGTCCCACCAGTTAGAGAATGCCTGTCCATTTACAACATTACGGAAGATCACCATGTTTGATCTGACGCCATCTGTGCTCACAAACCCAGCCATCTCCGCAGGTAGAGTCAGCGTTGATGGGAACAGGTTTGGTGGTCCCATCACTATAGCTGGGAGGTCCAATCCAGTCATTTTGGTCTGTCCGTTCACAATGTTGCGGTCCCAGCGGTAGCTGGACATTACTCTGGTGAATCCGTACGGGTGGGCCAACATAAAGGCTACAGACATTTTGTAAAGTCTAGAACATGAAGGATGACTGGAATCCCAGAATGTCACAATAGATGCACCTCCAGCACCATGTCCTCTCTGGTTATCATGATTGTCAATAAACACAAGAGCTTTATCAGAAGGCATGAAGCCCCAGCCCTCACCCCAGTTCTGACGTAGGATAGTTTTTCTCCATTCCATTTGCGGATGACATTGCCCAGCTTGGCACCATACTTGAACTCAGTCACCCTTCCAATTCCATAGTATTCACTTGATGTAATAGGCTCCCCACCGAGATCAATAACTCTTGGAAGATAAAAGGTCTTGCGCCAGAGGAAAACCACTTAGTGTTCAGATTATTAAGACGGCCATAGACAGCAGAAAGATCACCAGGCCACATGTGCTTGCAGGCGTCCACTCTGAATCCAGCCACTCCCATGTCAATCAGCTTGTTCATGTAGTCGGCCACCTTACCACGCACATAGTCCTTCTCCAAAGCCAAGTCCAGAAGACCAACCAGACGACAGTTTCTCACTTGGTTGATATCCTGGTAGTTCTCAATGTTTCCACTGCCAGTGTAGCATTTGCCATCATTGAAGTCCAAGTATGAGTATGGAACTGAGGAGAAGTCCTTGCTGTTGGCATCGAAATATGATCCACAGCTTGAGTGGGTACCAGATCCACCACCCGCACCACACATGTGGTTGATGACTGCATCAACGTAGATGTTCACCCCAACATTGTTGCACCTAGTGATCATGTCTCTCAGCTCATTTTCATTTCCTGATCTGGAACACAGATTGTAACCGATGGGCTGATATCTCTGCCACCAAGGGTGCCAGGGGTTTGTGACAATAATGTTCTCACTTGGAGGGGAGATCTGAACTCCACCAAAGCCATTTGGTCCGAGGTAGCGCTCGCACTCCGCTGCAATATCAGTCCAGCGCCACTCAAACAGGTGGACGATGGCAGTTCTTCCATCTTTGGTGTTTGGGTCGAACTGAGCGAGGCTCAGTCCAAGCAATGTTGCCAAGATTAGAAGCTTCATCCTTCCCTAGTTCAGAGAAAAACCTA

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU30645 False 2240 lncRNA 0.44 9 4991403 5116579
TU30646 False 2283 lncRNA 0.44 9 4991403 5116579
TU30643 False 1560 lncRNA 0.36 9 5039788 5116579
TU30647 False 2330 lncRNA 0.34 8 5067702 5116579
TU30642 False 1882 lncRNA 0.45 9 5113017 5116579
TU30644 True 1741 lncRNA 0.46 10 5113017 5116579

Neighbor

gene id symbol gene type direction distance location
CI01000004_04924543_04956339 VAV3B coding upstream 34968 4924508 ~ 4956435 (+)
CI01000004_04798717_04889650 ARHGEF4 coding upstream 101753 4798717 ~ 4889650 (+)
CI01000004_04786239_04788953 NA coding upstream 202442 4786239 ~ 4788961 (+)
CI01000004_04754556_04784656 ATR coding upstream 206646 4754556 ~ 4784757 (+)
CI01000004_04690908_04706755 ATP1B3A coding upstream 284503 4690908 ~ 4706900 (+)
CI01000004_05154049_05203177 COL11A1B, COL11A1 coding downstream 37470 5154049 ~ 5203177 (+)
CI01000004_05227614_05231253 OLFM3, OLFM3A, OLFM3B coding downstream 111035 5227614 ~ 5232052 (+)
CI01000004_05238552_05246750 TECRL2B coding downstream 120625 5237204 ~ 5247114 (+)
CI01000004_05343381_05353920 NA coding downstream 226802 5343381 ~ 5354231 (+)
CI01000004_05389431_05393230 TMEM56 coding downstream 272791 5389370 ~ 5394211 (+)
G27295 NA non-coding upstream 90566 4895552 ~ 4900837 (+)
G27305 NA non-coding upstream 235176 4755730 ~ 4756227 (+)
G27278 NA non-coding upstream 267773 4723420 ~ 4723630 (+)
G27271 NA non-coding upstream 295486 4694973 ~ 4695917 (+)
G27265 NA non-coding upstream 304481 4686708 ~ 4686922 (+)
G27388 NA non-coding downstream 16626 5133205 ~ 5133577 (+)
G27753 NA non-coding downstream 90269 5206848 ~ 5208660 (+)
G27757 NA non-coding downstream 103036 5219615 ~ 5220010 (+)
G27780 NA non-coding downstream 132255 5248834 ~ 5249065 (+)
G27782 NA non-coding downstream 137090 5253669 ~ 5254045 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 1438957 3550329 ~ 3553423 (+)
G26245 NA other upstream 1469010 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 2232465 2745885 ~ 2769135 (+)
G25992 NA other upstream 2254635 2736536 ~ 2736768 (+)
G25882 NA other upstream 2418354 2548075 ~ 2573049 (+)
G27805 NA other downstream 256246 5372825 ~ 5373803 (+)
G28165 NA other downstream 616010 5732589 ~ 5733001 (+)
G28302 NA other downstream 1353449 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 1454641 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 2538193 7654234 ~ 7656383 (+)

Expression


Co-expression Network