G61678 (LOC107665067,LOC107598994,LOC107757984)


Basic Information

Item Value
gene id G61678
gene name LOC107665067,LOC107598994,LOC107757984
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6756105 ~ 6766543 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU91310
CAGCAAGCTGAGAGTGATGAGCATGCAACCTCTTTCAATTACGTTATAACTATTTCatgatttttactgtgtttttgatcaaataaatactacCCTTGGTGAGCGTAAAAgatttcttaacatttttttttttttttttttTGATGTAAAGCACACCTTTAATGACCGAGATTCTGCATGCATTCTAACTCTATGCATAACGTGATATTGTTACATAAATGAATTTGTgataaaagaatgaatgaatgtagaACTGaaagtttgattttttttttttttggcgagaCACTGTTGTGATGTCTTTTTATGGGTTGAGTGGATTGATTATTCTTCCCATGAAAAGCGGAGCGGCAGCCTCATCGCTCCACAGTATAAGAACGAAGGGCTGCAGAGCTGTAAAAGAAGAGAAGGAGCGAGAAAACGAGATGCTTGTGGCTGCAGCGGCCTCCACTCCCTTCTCCGTCAGCGAGAGAAAGGCCCTGTGACGAGCTTCTGAGATGAATGATTTAGAGTCCTCCTGAAATATTCCACACAAGTTAGGATCTGAGAAGAGATCTGACAAACCTGAGGCAAAGAGGAGAGGTGAGGAGAactctgtcattatttactcgtcCGTATTTGTTCTAACTCtgcatgctgttattttttttcccccgtgGAATACAAAATGAGAATTTTTAAAGCTTACACTCTTAAAAgaaaaggtgcttaaaaggttctttgcAAGCGATGCCACAGAGgaaacatttttggttccaaAAAGAACTATTCAGTCAAAGGTTATTCATCTCTttatacctttttataatctgaagaacctacTTGCAACAAGaaacttttgtgaaacagaaaggttcttcagatgttaaaggttctttatggaaccatttagacaaaatgtAGTTCTATggcattttgtatttattgttgccaaaaatgagtaaaaagtgcccaaaaaaaacacaaatatatataaaaaagtggtctatatgactgtatttcaagttATCCAGAGCCATATCATAGTTTGCAGTCAGAAACAGACcaacattttttatatcatatgttttcaatgaaaaattacaaacatttaatatacgACTTTCTATATGTTTTGATTTCCTgatatgtatattgtataaaaaatgGGATTgtgtatatgttaaaaaaattatgttataaaaaaattctccttttgtgttctaatgagaaaatgaattgcaggtttggaacaagatAAGTAAATGCTGCAGCATTTTGGAGTGGATTTAGTGGCTTTCTTACCCTGTTTCTTCAGTACGTCCCCTAGTTGTGTGTCCACTGTAAGTTTAATTTTAGGCAGTGTGACCTCAGCGGTTTGGGCTGGAATTTTATTCATCTCAGATATCATTGCTTCAATAGaatctttgtttatattattcTCCATCAACACAAAGGATTTTTCTGTCGTTGTGTGGGGAATCAGTATGTACAGGCTGTTTTTACCCGTGAGAGGGAACTTTGCAACCTGGAGAAATAATTCTGCAATGTACTTCTACAAATACATACAACTGCTTGCAGTTCATTCACAGGAAATGGTGACATTTATTCAATGTTAAATTAaggattttttattattttattatttgtatttagataacataatttaattcaaattcttttaatgtttttacatttttacaattttaacttttttaataattattttttataattattattcagcTATGGTAAAAGGGTACATGCAAATTATCTGATATTCTGAagtgaaaaaattatatatattggTTAATTGCATTCACAATAAAAGTTTGCGTAATGTGtgtatactatatttattttatatatatataaatacaaacgcatGTATGTAATGTTTAAGGAAACTatgatatgtttatatattatatataaaaaaatataagaatataaatatatcagtatatatacatgtaaatattttccaaatatatacagtatgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacacacatacattaggTGAGTAATGTCGTTATCAAGTCAAATGGTCTTGATTAGCACCGTTTCCTGATAATGACCTTTGTGCATTAATTGCGACACTTACCTCAGcttgtaattttttgttgtaGCCCATTTGAAGGTTGTACTTGGGGCTGTAGAGAGTCTGCACTTCTATGAGCTCACCTGAAAACGTCGTGAAGTTGTCCCATTTATTtgtggattcaaaaacggtctTCCATTTACCTTCAAAGCACGAAGAAACATAAACGCAGTGTCATCAAAAATAGACAGGTATACAGCATTCAGATATACAATATCACTTACCATTAAAGTAGACcgcatttaacaaaataaatgtgtaggTGGGATCCATATAATCCATCAACTGAGTGATTTTCTGGTTGGTCTTCTTTGCCACCCACTGATTGATGAGAATCAAGTTTTCTTCGGCGTCATCGGTCAGCTTCTCTGGCACGGCATCATAGAACTCCTTTGACTGGTTGACAAACACTTCTCCCAACTGTTGCTCtatgaagaaacaaaacccTTCAAGCTATGGCTATGACTGCAGGCAGTATTCCAGCGTCCCTCCTGAGGTACAGATCCcattcaaaaacaaac
>TU91311
CAGCAAGCTGAGAGTGATGAGCATGCAACCTCTTTCAATTACGTTATAACTATTTCatgatttttactgtgtttttgatcaaataaatactacCCTTGGTGAGCGTAAAAgatttcttaacatttttttttttttttTGATGTAAAGCACACCTTTAATGACCGAGATTCTGCATGCATTCTAACTCTATGCATAACGTGATATTGTTACATAAATGAATTTGTgataaaagaatgaatgaatgtagaACTGaaagtttgattttttttttttttggcgagaCACTGTTGTGATGTCTTTTTATGGGTTGAGTGGATTGATTATTCTTCCCATGAAAAGCGGAGCGGCAGCCTCATCGCTCCACAGTATAAGAACGAAGGGCTGCAGAGCTGTAAAAGAAGAGAAGGAGCGAGAAAACGAGATGCTTGTGGCTGCAGCGGCCTCCACTCCCTTCTCCGTCAGCGAGAGAAAGGCCCTGTGACGAGCTTCTGAGATGAATGATTTAGAGTCCTCCTGAAATATTCCACACAAGTTAGGATCTGAGAAGAGATCTGACAAACCTGAGGCAAAGAGGAGAGGTGAGGAGAactctgtcattatttactcgtcCGTATTTGTTCTAACTCtgcatgctgttattttttttcccccgtgGAATACAAAATGAGAATTTTTAAAGCTTACACTCTTAAAAgaaaaggtgcttaaaaggttctttgcAAGCGATGCCACAGAGgaaacatttttggttccaaAAAGAACTATTCAGTCAAAGGTTATTCATCTCTttatacctttttataatctgaagaacctacTTGCAACAAGaaacttttgtgaaacagaaaggttcttcagatgttaaaggttctttatggaaccatttagacaaaatgtAGTTCTATggcattttgtatttattgttgccaaaaatgagtaaaaagtgcccaaaaaaaacacaaatatatataaaaaagtggtctatatgactgtatttcaagttATCCAGAGCCATATCATAGTTTGCAGTCAGAAACAGACcaacattttttatatcatatgttttcaatgaaaaattacaaacatttaatatacgACTTTCTATATGTTTTGATTTCCTgatatgtatattgtataaaaaatgGGATTgtgtatatgttaaaaaaattatgttataaaaaaattctccttttgtgttctaatgagaaaatgaattgcaggtttggaacaagatAAGTAAATGCTGCAGCATTTTGGAGTGGATTTAGTGGCTTTCTTACCCTGTTTCTTCAGTACGTCCCCTAGTTGTGTGTCCACTGTAAGTTTAATTTTAGGCAGTGTGACCTCAGCGGTTTGGGCTGGAATTTTATTCATCTCAGATATCATTGCTTCAATAGaatctttgtttatattattcTCCATCAACACAAAGGATTTTTCTGTCGTTGTGTGGGGAATCAGTATGTACAGGCTGTTTTTACCCGTGAGAGGGAACTTTGCAACCTGGAGAAATAATTCTGCAATGTACTTCTACAAATACATACAACTGCTTGCAGTTCATTCACAGGAAATGGTGACATTTATTCAATGTTAAATTAaggattttttattattttattatttgtatttagataacataatttaattcaaattcttttaatgtttttacatttttacaattttaacttttttaataattattttttataattattattcagcTATGGTAAAAGGGTACATGCAAATTATCTGATATTCTGAagtgaaaaaattatatatattggTTAATTGCATTCACAATAAAAGTTTGCGTAATGTGtgtatactatatttattttatatatatataaatacaaacgcatGTATGTAATGTTTAAGGAAACTatgatatgtttatatattatatataaaaaaatataagaatataaatatatcagtatatatacatgtaaatattttccaaatatatacagtatgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatacacacatacattaggTGAGTAATGTCGTTATCAAGTCAAATGGTCTTGATTAGCACCGTTTCCTGATAATGACCTTTGTGCATTAATTGCGACACTTACCTCAGcttgtaattttttgttgtaGCCCATTTGAAGGTTGTACTTGGGGCTGTAGAGAGTCTGCACTTCTATGAGCTCACCTGAAAACGTCGTGAAGTTGTCCCATTTATTtgtggattcaaaaacggtctTCCATTTACCTTCAAATAGACcgcatttaacaaaataaatgtgtaggTGGGATCCATATAATCCATCAACTGAGTGATTTTCTGGTTGGTCTTCTTTGCCACCCACTGATTGATGAGAATCAAGTTTTCTTCGGCGTCATCGGTCAGCTTCTCTGGCACGGCATCATAGAACTCCTTTGACTGGTTGACAAACACTTCTCCCAACTGTTGCTCtatgaagaaacaaaacccTTCAAGCTATGGCTATGACTGCAGGCAGTATTCCAGCGTCCCTCCTGAGGTACAGATCCcattcaaaaacaaac
>TU91312
CAGCAAGCTGAGAGTGATGAGCATGCAACCTCTTTCAATTACGTTATAACTATTTCatgatttttactgtgtttttgatcaaataaatactacCCTTGGTGAGCGTAAAAgatttcttaacattttttttttttttttTGATGTAAAGCACACCTTTAATGACCGAGATTCTGCATGCATTCTAACTCTATGCATAACGTGATATTGTTACATAAATGAATTTGTgataaaagaatgaatgaatgtagaACTGaaagtttgattttttttttttttggcgagaCACTGTTGTGATGTCTTTTTATGGGTTGAGTGGATTGATTATTCTTCCCATGAAAAGCGGAGCGGCAGCCTCATCGCTCCACAGTATAAGAACGAAGGGCTGCAGAGCTGTAAAAGAAGAGAAGGAGCGAGAAAACGAGATGCTTGTGGCTGCAGCGGCCTCCACTCCCTTCTCCGTCAGCGAGAGAAAGGCCCTGTGACGAGCTTCTGAGATGAATGATTTAGAGTCCTCCTGAAATATTCCACACAAGTTAGGATCTGAGAAGAGATCTGACAAACCTGAGGCAAAGAGGAGAGGTGAGGAGAactctgtcattatttactcgtcCGTATTTGTTCTAACTCtgcatgctgttattttttttcccccgtgGAATACAAAATGAGAATTTTTAAAGCTTACACTCTTAAAAgaaaaggtgcttaaaaggttctttgcAAGCGATGCCACAGAGgaaacatttttggttccaaAAAGAACTATTCAGTCAAAGGTTATTCATCTCTttatacctttttataatctgaagaacctacTTGCAACAAGaaacttttgtgaaacagaaaggttcttcagatgttaaaggttctttatggaaccatttagacaaaatgtAGTTCTATggcattttgtatttattgttgccaaaaatgagtaaaaagtgcccaaaaaaaacacaaatatatataaaaaagtggtctatatgactgtatttcaagttATCCAGAGCCATATCATAGTTTGCAGTCAGAAACAGACcaacattttttatatcatatgttttcaatgaaaaattacaaacatttaatatacgACTTTCTATATGTTTTGATTTCCTgatatgtatattgtataaaaaatgGGATTgtgtatatgttaaaaaaattatgttataaaaaaattctccttttgtgttctaatgagaaaatgaattgcaggtttggaacaagatAAGTAAATGCTGCAGCATTTTGGAGTGGATTTAGTGGCTTTCTTACCCTGTTTCTTCAGTACGTCCCCTAGTTGTGTGTCCACTGTAAGTTTAATTTTAGGCAGTGTGACCTCAGCGGTTTGGGCTGGAATTTTATTCATCTCAGATATCATTGCTTCAATAGaatctttgtttatattattcTCCATCAACACAAAGGATTTTTCTGTCGTTGTGTGGGGAATCAGTATGTACAGGCTGTTTTTACCCGTGAGAGGGAACTTTGCAACCTGGAGAAATAATTCTGCAATGTACTTCTACAAATACATACAACTGCTTGCAGTTCATTCACAGGAAATGGTGACATTTATTCAATGTTAAATTAaggattttttttttttttttttg

Function

NR:

description
PREDICTED: plasma protease C1 inhibitor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91310 True 2684 lncRNA 0.33 2 6756105 6760746
TU91311 False 2570 TUCP 0.33 4 6756105 6760746
TU91312 False 1622 TUCP 0.35 3 6756105 6766543

Neighbor

gene id symbol gene type direction distance location
lonrf1l lonrf1,lonrf1l,LOC107755312,LOC107599034,LOC107602980 coding upstream 52820 6691984 ~ 6703285 (+)
jak3 jak3,LOC107598991,LOC107557194,LOC107758021 coding upstream 90793 6651376 ~ 6665312 (+)
slc5a5 slc5a5 coding upstream 105070 6644521 ~ 6651035 (+)
itgb4 itgb4,LOC107758026,LOC107599031,LOC107557197,LOC107700296 coding upstream 179782 6550165 ~ 6576323 (+)
LOC122351095 sap30bp,LOC107725325 coding upstream 208572 6535877 ~ 6547533 (+)
ugt5e1 ugt5e1,LOC107755303 coding downstream 36973 6803516 ~ 6807969 (+)
tpk2 si:dkey-6n6.2,LOC107758011,LOC107755292,LOC107699255,LOC107665075,LOC107603148 coding downstream 71097 6837640 ~ 6841972 (+)
LOC122350510 xpr1a,LOC107758009,LOC107755298,LOC107665065,LOC107699288,LOC107603171,LOC107599040 coding downstream 179885 6946428 ~ 6995662 (+)
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding downstream 292448 7058991 ~ 7087640 (+)
LOC122350454 cacna1e,LOC107599003 coding downstream 405117 7171660 ~ 7281161 (+)
G61669 b3gnt3,LOC107665060,LOC107599054,LOC107755313 non-coding upstream 81637 6670282 ~ 6674468 (+)
G61617 LOC107744595,LOC107758025 non-coding upstream 88520 6629241 ~ 6667585 (+)
G61612 kcnn1b,kcnn1,LOC107725296,LOC107598990,LOC107700497,LOC107557189 non-coding upstream 147678 6602842 ~ 6608427 (+)
G61609 LOC107725329,LOC107665009,LOC107598988,LOC107758028,LOC107557178,LOC107699027 non-coding upstream 156408 6596309 ~ 6599697 (+)
G61606 NA non-coding upstream 204541 6551325 ~ 6551564 (+)
G61700 NA non-coding downstream 34463 6801006 ~ 6801546 (+)
G61705 NA non-coding downstream 50352 6816895 ~ 6817555 (+)
G61706 NA non-coding downstream 52186 6818729 ~ 6818939 (+)
G61707 LOC107665058,LOC107550196,LOC107700508,LOC107755294,LOC107757994,LOC107599037 non-coding downstream 54819 6821362 ~ 6821623 (+)
G61710 NA non-coding downstream 60950 6827493 ~ 6829683 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 1491739 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 1526497 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 2682208 4029303 ~ 4073897 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other upstream 2824617 3924861 ~ 3931488 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other upstream 2905548 3848614 ~ 3850557 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other downstream 81938 6848481 ~ 6849711 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other downstream 539576 7306119 ~ 7529086 (+)
smim15 smim15,LOC107700545 other downstream 1710628 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 2937938 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 3582371 10348914 ~ 10367863 (+)

Expression


Co-expression Network