G140671


Basic Information

Item Value
gene id G140671
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11454570 ~ 11454829 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU190476
taaaatcaaaccctacacctaaccctaaccttaacccttaatcaaccctaaaattaaaccctacacctaaccctaaccttaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccttaacctaaacttaaaatctaaccctaaacccaatcctaaaatattaagataagcgtttgggttagagttgaatgtagggttatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190476 True 212 lncRNA 0.35 2 11454570 11454829

Neighbor

gene id symbol gene type direction distance location
LOC111194307 NA coding upstream 1964 11451935 ~ 11452606 (+)
LOC111194236 NA coding upstream 3627 11450374 ~ 11450943 (+)
LOC103030487 NA coding upstream 15617 11438421 ~ 11438953 (+)
LOC103030163 NA coding upstream 19000 11433551 ~ 11435570 (+)
LOC111194235 NA coding upstream 25199 11428868 ~ 11429371 (+)
LOC103022687 NA coding downstream 26920 11481749 ~ 11493706 (+)
nol7 NA coding downstream 66611 11521440 ~ 11530907 (+)
retreg1 fam134b coding downstream 121283 11576112 ~ 11607386 (+)
LOC103030795 NA coding downstream 189207 11644036 ~ 11655408 (+)
LOC103026935 ralyl coding downstream 217779 11672608 ~ 11754085 (+)
G140670 NA non-coding upstream 10364 11443841 ~ 11444206 (+)
G140563 NA non-coding upstream 325661 11127288 ~ 11128909 (+)
G140556 NA non-coding upstream 450044 11003817 ~ 11004526 (+)
G140550 NA non-coding upstream 475480 10978574 ~ 10979090 (+)
G140543 NA non-coding upstream 505085 10949255 ~ 10949485 (+)
G140676 epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 non-coding downstream 46227 11501056 ~ 11520012 (+)
G140637 NA non-coding downstream 51835 11506664 ~ 11513421 (+)
G140666 NA non-coding downstream 77990 11532819 ~ 11535275 (+)
G140688 NA non-coding downstream 115172 11570001 ~ 11570202 (+)
G140695 NA non-coding downstream 174587 11629416 ~ 11635600 (+)
G140659 NA other upstream 71065 11380098 ~ 11383505 (+)
G140520 NA other upstream 655679 10798545 ~ 10798891 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other upstream 1010030 10427266 ~ 10444540 (+)
G140402 NA other upstream 1054594 10395520 ~ 10399976 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other upstream 1109099 10311100 ~ 10345471 (+)
LOC111194237 NA other downstream 656 11455485 ~ 11478740 (+)
G140931 NA other downstream 783159 12237988 ~ 12240625 (+)
G140930 NA other downstream 924167 12378996 ~ 12381554 (+)
G141086 NA other downstream 1286644 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 1387969 12842798 ~ 12860327 (+)

Expression


Co-expression Network