nol7


Basic Information

Item Value
gene id nol7
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11521440 ~ 11530907 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678014.1
CTCCTCGGGTCTGTGATATCAGCGCGTCTCTCAGCATGGCGAAGCTTCAGCGTGGGGAATCTGAGTGTGAGTTAGAAAAAGGAGTGAGAGTTAGTGTAGAAATGTCTGATTCCAGTGAGGATGAGGGTCCTGAAGAGGTGGCGTTTGAAGAGTCTAGATCCGCTGCTCTGAAGAGTGAGGAGGAGAAGCTGCAGGCCGCTAAGAGGGAAAAGGAGCTGCTgaaggagaaaagaagaaaaaggcaGCAGTTTTTCCAGGAACAAAAGaaAAAAAGGCTTCTTTCAGACACACTTTTGGAAGAGTTTGATACAGTACCACAGAAACAAAAGAAGCTTTCAGATGACAGAGATGAGGAGAAGGACAACAAACAGCAGAAGCTGACTAagtcaaagaaaaagaaagcatcTAGAAGtttgcaGGGAAACTGCAGTGTGATGCGTCTGAAGGACGAGTCCGCTGATTCTTCAATGCAGCAGTCAGCCATGGACTTCATTCAAGCACGCCTCTACGGATCAGGAACCTTGAGAACAACCAATGCTGAGCTTCTGTCCCTGGAAAAGAAAAGGGGTGTGAAAAAGGGAGCTGCAGTGCAGTTTGTGAATAAGAAGTGGGGAGCAGAACAGAAGGCCAAGGCTGAGAAGTCCAACAAGAGATTTATTCACAGGCAGAAGCTCGTTACCACCTGAGAgctggaacattttttttattggatgttTTGGAGGTGATGGCTACATCAAAGAAAACTTTCCAGCTCACCTCACTGGACCTTTCTGCTGTTTTAGCAGCTGCGGCAGCTGAAGGTTGGAGGGCTGTAGGCAAAGTGACTGTCTACAGGGGGTTTGTGGCAACTCTGGACCAAACATTATAGGGGGTCTTATGGCTGTGGAAGCACCTCATAGTGaaataactgtgtaatttgAGTTTAAGtcattgtaaaacaaaaaaacttggaCATTTTTGGTTGTATTATATTATGGTCACAGTGGATAGTGTTCTGATACTAGGCCTTATTGAAAATACAGTTATGTAATCTTATCTTGTTTATGATTGATTTAAATTGAGTTGAGTGCTGGTATGAAAATTGCTGTAACTATTAGTTATTAACTAGTTTTGCAGACAGGGGTATTAGGCCTAGTTTTGGACTGCATATCATTTTTGAATAGAGATTTAGCATTGAAAGATGAATTTAGTCttggactaggcttaatccctgtctgggaaactgacccaaTATGTCCTTGAAGTGAAGGAgatattacattttgttttaaagcaGCGGCTTTAGTTAAATCGAATCTTTATCATTTACACAATTTACTCCTAGACCGGTTAAATGCGGTTAGGTAATTTATCTCTTGGCCagcattttatatgttttagtttGATTGTTTAAGTGGTACAAATTTGAAAAGCCTGTATTGTTAAGCAGACCAGTATGTGTGTTATGTTTTCcctggatgaccagctttcCTACCACCTCAAAGACCAGCTTAACCCTTTCAACACCACAGATCAGTACTAGCTAGGCTtgagttggatttttttttaggagattTTCTTTGTTGTCTGAAGTAAAGACAGCCCCTCTGTACATTTTTGGTTAAATGTTTGCTTTAAATAATGTACAtgctttattttctaaaaacaaacaagacaTTTGAATGCTGTGTCTCCTTCATTGAGTGTACTTTGCCTTCTACACGTTTTTGATAAAGCTTTGTTTAAATG

Function

NR:

description
nucleolar protein 7

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0016072 rRNA metabolic process biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0034470 ncRNA processing biological_process
GO:0006364 rRNA processing biological_process
GO:0006396 RNA processing biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0034660 ncRNA metabolic process biological_process
GO:0030684 preribosome cellular_component
GO:0030687 preribosome, large subunit precursor cellular_component
GO:1990904 ribonucleoprotein complex cellular_component

KEGG:

id description
ko03040 Spliceosome
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678014.1 True 1728 mRNA 0.41 8 11521440 11530907

Neighbor

gene id symbol gene type direction distance location
LOC103022687 NA coding upstream 27734 11481749 ~ 11493706 (+)
LOC111194307 NA coding upstream 68834 11451935 ~ 11452606 (+)
LOC111194236 NA coding upstream 70497 11450374 ~ 11450943 (+)
LOC103030487 NA coding upstream 82487 11438421 ~ 11438953 (+)
LOC103030163 NA coding upstream 85870 11433551 ~ 11435570 (+)
retreg1 fam134b coding downstream 45205 11576112 ~ 11607386 (+)
LOC103030795 NA coding downstream 113129 11644036 ~ 11655408 (+)
LOC103026935 ralyl coding downstream 141701 11672608 ~ 11754085 (+)
lrrcc1 lrrcc1 coding downstream 224754 11755661 ~ 11781589 (+)
e2f5 LOC108437220,LOC108268108 coding downstream 253170 11784077 ~ 11795844 (+)
G140676 epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 non-coding upstream 1428 11501056 ~ 11520012 (+)
G140637 NA non-coding upstream 8019 11506664 ~ 11513421 (+)
G140644 NA non-coding upstream 65633 11452019 ~ 11455807 (+)
G140671 NA non-coding upstream 66611 11454570 ~ 11454829 (+)
G140670 NA non-coding upstream 77234 11443841 ~ 11444206 (+)
G140666 NA non-coding downstream 1912 11532819 ~ 11535275 (+)
G140688 NA non-coding downstream 39094 11570001 ~ 11570202 (+)
G140695 NA non-coding downstream 98509 11629416 ~ 11635600 (+)
G140791 NA non-coding downstream 285659 11816566 ~ 11819156 (+)
G140795 NA non-coding downstream 304579 11835486 ~ 11836832 (+)
LOC111194237 NA other upstream 42700 11455485 ~ 11478740 (+)
G140659 NA other upstream 137935 11380098 ~ 11383505 (+)
G140520 NA other upstream 722549 10798545 ~ 10798891 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other upstream 1076900 10427266 ~ 10444540 (+)
G140402 NA other upstream 1121464 10395520 ~ 10399976 (+)
G140931 NA other downstream 707081 12237988 ~ 12240625 (+)
G140930 NA other downstream 848089 12378996 ~ 12381554 (+)
G141086 NA other downstream 1210566 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 1311891 12842798 ~ 12860327 (+)
G141361 tcea1 other downstream 2324696 13855603 ~ 13858605 (+)

Expression


Co-expression Network