G41441


Basic Information

Item Value
gene id G41441
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2414351 ~ 2414581 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47049
TTTTTTAGGCTGGATGAAGCTAATGCGCATGCGCAGACCTAAATGCGCATCTCTTGCGCCTAATTTCGGAGGCGCGCGTCTGACTGTTTCTATAGAAACCGGAGCTTCTAACGGCCGCTGCAGTGACGCGATGACTTTACCAGTTGGCGTTTGGCTCTTATTTAAAAGGCGGGACTTATTCCGCCATATTGCGCGTTGCACTTTCTCCCATTCAAAACAATACGAGTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47049 True 231 lncRNA 0.36 1 2414351 2414581

Neighbor

gene id symbol gene type direction distance location
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 14400 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 31950 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 137670 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 154712 2241091 ~ 2259639 (+)
CI01000006_02181904_02185719 NA coding upstream 228059 2180910 ~ 2186292 (+)
CI01000006_02490349_02491048 NA coding downstream 75768 2490349 ~ 2491118 (+)
CI01000006_02531899_02588907 NRG2A coding downstream 117235 2531816 ~ 2589763 (+)
CI01000006_02613864_02614742 NA coding downstream 199173 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 201899 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 251368 2665949 ~ 2677215 (+)
G41440 NA non-coding upstream 35724 2378330 ~ 2378627 (+)
G41387 NA non-coding upstream 141082 2273046 ~ 2273269 (+)
G41344 NA non-coding upstream 145087 2267329 ~ 2269264 (+)
G41360 NA non-coding upstream 188374 2199065 ~ 2225977 (+)
G41347 NA non-coding upstream 251320 2162556 ~ 2163031 (+)
G41449 NA non-coding downstream 16243 2430824 ~ 2431137 (+)
G41452 NA non-coding downstream 21823 2436404 ~ 2436629 (+)
G41453 NA non-coding downstream 22649 2437230 ~ 2437452 (+)
G41457 NA non-coding downstream 28031 2442612 ~ 2442976 (+)
G41461 NA non-coding downstream 31143 2445724 ~ 2445934 (+)
G41170 NA other upstream 718530 1692065 ~ 1695821 (+)
G40768 NA other upstream 1921325 488407 ~ 493026 (+)
G40767 NA other upstream 1931016 360009 ~ 484185 (+)
G40772 NA other upstream 1935157 475465 ~ 479194 (+)
G41424 NA other downstream 231081 2645662 ~ 2660570 (+)
G41591 NA other downstream 421586 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1314649 3734554 ~ 3736035 (+)
G41996 NA other downstream 2702625 5117206 ~ 5124149 (+)
G43896 NA other downstream 3355508 5770089 ~ 5771775 (+)

Expression


Co-expression Network