xpr1 (xpr1,LOC108267842,LOC107593799,LOC107681714,LOC107722139,LOC105029208)


Basic Information

Item Value
gene id xpr1
gene name xpr1,LOC108267842,LOC107593799,LOC107681714,LOC107722139,LOC105029208
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4397508 ~ 4432770 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250693.3
TGACGTCACCACCTGACAACACTATGGCGGCTGCCAGAGCTTTGGgctccagaaaacacactgaggAGAAGGCGATGTTTGAGGCTTTGTGAGGCGCTTTTCGCTTGTGGCCGACGGGCAGCCCGTTAGATAGGAAATTCACCTGATAAATGAAGGGGAAAGCGAGGGGGGTCGTTTCAGGAATATGCCGGAGGTTGGTCTGTTTCCCCGCGGTTGTGCTGGCGGAGAGCAGCGGCCGTAGCGTTCATCACGTCTGTCCGGGAGGGAGAAGCGATTTCCAGCCACTGAGGcttttatttaaccctttatcTCGTTGAACGGCGCTAGCCTTCGTTTTCCCCGCAGAAGGAGCCGTTAACGGGCAGCAGACAACCGCACAGGATGAAATTTACCGAGCATCTGTCAGCGCACATCACTCCGGAGTGGAGGaaacagtacatacagtatgagGCTTTCAAGGAGATGCTGTACTCCGCCCAGGACCAGGCTCCATCAATCGAAGTCACAGACGAAGACACAGTTAAGCGATACTACGCCAAGTTTGAGGAGAAGTTCTTCCAAACATGCGAGAAGGAACTGGCCAAAATCAACACATTCTATTCAGAGAAGCTGGCTGAGGCTCAGAGACGCTTCGCCACGCTGCAGAATGAGCTGCAGTCATCGCTGGATGCTCAGAAGGAGAGCAGCCGAGCGCCGGGTCTCCGCCGCCGCCGCGCCGTCTTCCACCTGTCGCAGCAGGAGCGCTGCAAACACCGCAACATTAAAGACCTGCAGCTGGCCTTCAGCGAGTTCTACCTCAGCCTCATCCTGCTGCAGAACTACCAGAACCTGAACTTCACTGGTTTCCGCAAAATCCTAAAGAAGCATGATAAGATCTTTGAGACGTCGAGGGGGGCGGACTGGCGGGTGGCCCACGTGGAGGTTGCACCTTTCTACACCTGCAAGAAAATCACTCAGCTCATCTCTGAGACTGAGGCCCTGGTCACCACAGAGTTGGAGGggggagacagacagaaagcaaTGAAGAGGCTTCGAGTGCCTCCTTTGGGTGCAGCACAGCCTGCGCCAGCGTGGACCACGTTTAGAGTTGGACTGTACTGTGGAGTCTTTATAGTTTTATTAGCAACCATCACTATCACAGGTGTGGCCACTCTGATATTTTCTCAGAGTTCAGACAGTCAGCCCAGCCTGTGGCCGCTAGTGCGGATCTACCGCGGCGGTTTCCTGCTCATCGAATTTCTCTTCTTGTTGGGCATCAACACATACGGCTGGAGGCAGGCAGGTGTGAACCACGTGCTGATCTTTGAGCTCAACCCTCGCAACAACCTCTCCCACCAGCATCTCTTCGAGATCGCTGGTTTTCTGGGAGTGCTGTGGTGTCTCAGCATCCTGTCCTGTCTCTTCTCTGAGTCTCTAAATATCCCTATTCAGGCCAGCCCTCTGGCACTTTATGGCTTCTTCCTGCTTTTCCTCATCAATCCGTTCAAGACCTGCTACTACAAGTCCCGCTTCTGGCTGCTCAAATTACTGTTCCGAGTGGTCACAGCTCCGTTTCACAGAGTGGAGTTCGCTGATTTCTGGCTGGCCGATCAGCTTAACTCCCTGGCTGTGCTTCTGATGGACCTGGAGTACCTGGTCTGCTTCTACAGCGTAGAGCTGGACTGGACAAAGTCATACAAAGACCTCAACTCTAAAAATGgtATGTGTAACACATACTCGTATGGAGTGCGGGCAGTGATCCAGTGTCTGCCTGCCTGGTTCCGGTTTGTGCAGTGCCTGAGGCGTTACAGAGACACAAAGCGTGCCTTCCCTCATTTAGTTAACGCTGGCAAATACTCCACAACCTTCTTTGTTGTGACTTTTGCAGCCctctacaaaacacacaaagcTAATGACCACGATGACAAGGACATTTTCTTCTATTTGCTGATCGCCTTCTCGGTGATCAACTCGTGCTACACTCTAGTGTGGGACCTTAAGATGGACTGGGGTCTGTTCGACCGCAACGCAGGAGAGAACACTCTGCTGAGAGAGGAGATAGTCTACCCACAGAAAGCTTATTATTATTGTGCCATATTAGAAGATGTAATCTTGCGCTTTGCCTGGACTATTCCCCTCTCTATTGGGACTGTAACTTCATGCTGCCATATTTCTGATATTTTGGCCACTGTTCTTGCACCTCTGGAGGTCTTCAGACGCTTTGTGTGGAACTTCTTCCGTCTGGAGAACGAGCATCTGAACAACTGTGGTGAGTTCAGAGCGGTGCGGGACATCTCAGTGGCTCCACTGAATGCAGACGATCAGACGCTATTAGAGCAGATGATGGACCAGGAGGATGGGGTCAGGAACCGGCAGGGGAAGAAGAACTGGAAGAGAAGCTACAGCATGTCTCTTAGACGACCACGCCTCGCATCCCAATCCAAAATGCGAGACACCAAAGTTCTGATAGAGGACACGGACGACGACACCTGACCTCTGGCGGCCCTCTTTAGGGCTCATTTGAATGGACCACGGTCCCTTCAGgggccttaaaaaaaaagaagaaaaaaaaacaaaaaagcctCTAACGGCTTTACAATCAAGTCCATCACAAAGCTGCCTGTCTACACccacatacacatgcacacgGTCTCAGAGACGTTCCCACCCTGACCCACAcaccaagacacacacacagatggatacacacacacggacacacacacacacacacacacacgcattcaGTTCAGCACAGGCTTGTAATAACAGGAACAGTCATTCGTTTGTtagttactgtattataattattataatttgtttatttttgattcattgattcattGTTACTGCCTTGATTATTTTCAAAGCTCTGTTACATcgaaaaataatgaataatcaaAAGACTTGTATGTACGTTCGTTCGTTCGttggttcattcattcattcacatgCTACAGGGATCTAAGTGTGATAATCAAAAATATAAGACTGACTCTCGAAGTTCTGACCTCCGGAAACGGACAATATTAATTGTTATCACCAACAATCTGTTGGAACATCTTGTCTCGGTGTAACTTTTTACGAAGACGACTGTAGTGTTGGTTCATGTAGCAGTCCAGTAGATGCGTTAGCCATCACCAGTGGATacagttctattttttttttttctattataattgttgttgttattacgATTACTTTTTAAGAATGTACATTTCATTGTTATTTATGTGAAGGAAAGTTGCCTTGATCATTTAAGAGGAAGTAGTCATGTTTAATGTGTAAAGAAGCAAAGATGTATTGCGTCTGCCGATACAGATTCTCGCAGATACGGACCTCCGTTTGTTTGTACGCGTACTTCAAAACCCTCAGGTGGCTTGGGTGGTGGGATCGTTCCAATGACACACTTTTAAGTCATGTCATGTCGAGTGAACGCTCGAGTGAACACGCACCACTCGTGCAGGTCTGGCTGAGAAACCACTGAACTTTTCGAACTTGTTAAAGTTACGATGCCTATTAATAATTTCTTTTGAtgtta

Function

symbol description
xpr1 Enables several functions, including inositol hexakisphosphate binding activity; phosphate ion transmembrane transporter activity; and virus receptor activity. Involved in cellular phosphate ion homeostasis and phosphate ion transmembrane transport. Is intrinsic component of plasma membrane. Implicated in basal ganglia calcification.

NR:

description
PREDICTED: xenotropic and polytropic retrovirus receptor 1

GO: NA

KEGG:

id description
K24195 XPR1, PHO1; xenotropic and polytropic retrovirus receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250693.3 True 3520 mRNA 0.48 15 4397508 4432770

Neighbor

gene id symbol gene type direction distance location
LOC103036275 cdc14aa,LOC108411489 coding downstream 16085 4362073 ~ 4381423 (-)
LOC111194273 NA coding downstream 37211 4349790 ~ 4360297 (-)
LOC103025293 NA coding downstream 93422 4290412 ~ 4304086 (-)
LOC103024967 LOC108437498 coding downstream 107960 4281527 ~ 4289548 (-)
LOC103024655 NA coding downstream 127606 4236669 ~ 4269902 (-)
LOC103025914 NA coding upstream 3043 4435813 ~ 4453369 (-)
LOC103026217 nos1apb,LOC108428842 coding upstream 26999 4459769 ~ 4475917 (-)
LOC103036885 LOC103036885,LOC108428857 coding upstream 51463 4484233 ~ 4485985 (-)
LOC103037397 LOC108428887,LOC107681713,LOC107722123,LOC107560776 coding upstream 97766 4530536 ~ 4545488 (-)
LOC103038044 coa1,LOC103038044,LOC108428892,LOC108267121,LOC107600219 coding upstream 290616 4723386 ~ 4727528 (-)
G138913 NA non-coding downstream 576 4396090 ~ 4396932 (-)
G138910 NA non-coding downstream 46382 4332394 ~ 4351126 (-)
G138837 NA non-coding downstream 163326 4179824 ~ 4234182 (-)
G138822 NA non-coding downstream 221912 4172979 ~ 4175596 (-)
G138834 NA non-coding downstream 235028 4162212 ~ 4162480 (-)
G139011 NA non-coding upstream 273443 4706213 ~ 4707525 (-)
LOC111194275 NA non-coding upstream 319803 4752573 ~ 4754327 (-)
G139027 LOC107602621,LOC108268010,LOC107749088,LOC105907002,LOC106574506,LOC107678690,LOC102777581 non-coding upstream 388433 4821203 ~ 4838073 (-)
G139029 NA non-coding upstream 403012 4835782 ~ 4836531 (-)
G139003 NA non-coding upstream 406096 4838866 ~ 4854692 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other downstream 59311 4330871 ~ 4338197 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other downstream 536152 3847722 ~ 3861356 (-)
G138708 NA other downstream 563838 3832721 ~ 3833670 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 1222155 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 1282822 3095601 ~ 3114686 (-)
G139074 NA other upstream 843336 5276106 ~ 5276468 (-)
G139105 NA other upstream 897308 5330078 ~ 5330805 (-)
G139489 NA other upstream 1576283 6009053 ~ 6010867 (-)
LOC111194281 NA other upstream 1589839 6022609 ~ 6054733 (-)
G139487 NA other upstream 1872199 6304969 ~ 6374709 (-)

Expression


Co-expression Network