LOC103026217 (nos1apb,LOC108428842)


Basic Information

Item Value
gene id LOC103026217
gene name nos1apb,LOC108428842
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4459769 ~ 4475917 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677866.1
TACAGGAGACAGACAGCTGCAGGTTTGCAGGTTTAACTGAtgatttttcattaattttatcattttttttttatttatttcatcagTTTTCTGCTGTAATTTGCTGGAACTGTGGTTTGTGTAAGCGAGGCTGCACTGTCTTGAGCCACCACATGAAATCACTGctttaatattgtgttttttctgaGATTTAAAGCcacaatatttacaaaatgCCCGAGAAAACCAAGTATAACCTGGTGGATGACACGCTGGAGCCGAGGACGCCCGCGGACAACGACGACATCTTTCAGTACGGTGTCACGTTTGAGGTGAAGTTTGTGGGCAGTTTGGACGTTGTCAGACCCAAAAGCAGGCTGGAGATCCTGGCAGCCATGAGGAGGATACGGTACGAGTTTAAAGTGAAGAACATTAAGAAGACTAAAGTCAGCCTTGTCGTTGCAGTGGACGGCGTCAAAGTGGTTTTGCGCAAGAAGAAAAAGAAAAATGCGTACAGCTGGGATGAGAGTCAGGTAACACTGACGCAGGACCCTATTTACAGAATATTCTACGTTTCCCATGATTCCCAGGACCTGAAAATATTCAGTTACATCGCAAGAGATAAGAAAAGCAACGTGTTCCGCTGCAACGTCTTCAAATCCAAGAGAAAGAGCCAGGCTatgcggatagtgcggacaatCGGCCAGGCTTTTGAGGTTTGCCATAAACAAAGTCTGGACAGTGTTGACGCTTGGTTggtgaaagaggaggaggagagaagtGAAGAGGAGAAGACTTCCCCCTCAGAAACTACCACAGAGGAATCAGTCGAAAACAAAGACGCCAAGGATGTATCTGAAGACCCCGTGTTGGAAACAGAGCCGTCTAGACTGGCGTCCCCCGTGTCCGAGCCCCTGACTGTGAGCCATCAGGTGCAGCTGCTTCAGAggcagctccagcagcaggagcagaagAACCAGGCGGCTTCAGCGCAGGCGGTTCTgctccagcagcagctctcTGTGGAGTCGCGGGCGAGGGCGGAGGCTCAGTCCCGGGTGGAGCAGCTCCTTCAGCAGAACAGTGAACTCCTGCAGCACCTCTCCCTGCTGGTCAAACACATCCAGGAGCTGGAGCTGCGAGCACACTCCACCTCCTCCATGGGATCTCAGGACAGCCTGTTGGAGATCGCGCTGAGAGCTAACGCTGCGACAGGCCTGCCCCGCCCCTCCTCTCCACAAGGCGGCGCCCCCCGAGAGTCCAGCCTGGTCCAACTCAATTCTGCATTCTGCTTCTTTCCTGGACGTCCAGcacaggagaagaagaaggagcagGACCGAGACTCTGGGCAGGGTCAGGACGATGAGCAGCTGGCAGAAGCGTCTCCCACCGAGGGTCAGTTCTTCAACTCTCTCGAGACTCCCGGCTTCAGAGAGTCTGGCATCGCGTCCGGCTACGAGTCCAATACTGACGAGAGTGATGATCGGGACAGCTGGGGACAGTGAAGATCGGCAAAACTTGTGTGTCGGAAACACACTTTAGCCCTACTCTGccgagattagtttctcagggggtcatctgtgaaaaatatttcactcttGCATcaggactgcaattgaaaaaacaggagc

Function

symbol description
nos1apb Predicted to enable nitric-oxide synthase binding activity. Human ortholog(s) of this gene implicated in nephrotic syndrome type 22. Orthologous to human NOS1AP (nitric oxide synthase 1 adaptor protein).

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677866.1 True 1610 mRNA 0.51 10 4459769 4475917

Neighbor

gene id symbol gene type direction distance location
LOC103025914 NA coding downstream 6400 4435813 ~ 4453369 (-)
xpr1 xpr1,LOC108267842,LOC107593799,LOC107681714,LOC107722139,LOC105029208 coding downstream 26999 4397508 ~ 4432770 (-)
LOC103036275 cdc14aa,LOC108411489 coding downstream 78346 4362073 ~ 4381423 (-)
LOC111194273 NA coding downstream 99472 4349790 ~ 4360297 (-)
LOC103025293 NA coding downstream 155683 4290412 ~ 4304086 (-)
LOC103036885 LOC103036885,LOC108428857 coding upstream 8316 4484233 ~ 4485985 (-)
LOC103037397 LOC108428887,LOC107681713,LOC107722123,LOC107560776 coding upstream 54619 4530536 ~ 4545488 (-)
LOC103038044 coa1,LOC103038044,LOC108428892,LOC108267121,LOC107600219 coding upstream 247469 4723386 ~ 4727528 (-)
LOC103039099 wdr48,LOC103039099,LOC108428893,LOC108268031 coding upstream 263071 4738988 ~ 4748753 (-)
LOC103039917 LOC103039917,LOC108428861,LOC107602632,LOC107749223,LOC108267126,LOC107721708,LOC107588920 coding upstream 285836 4761753 ~ 4767293 (-)
G138919 NA non-coding downstream 38174 4420864 ~ 4421595 (-)
G138913 NA non-coding downstream 62837 4396090 ~ 4396932 (-)
G138910 NA non-coding downstream 108643 4332394 ~ 4351126 (-)
G138837 NA non-coding downstream 225587 4179824 ~ 4234182 (-)
G138822 NA non-coding downstream 284173 4172979 ~ 4175596 (-)
G139011 NA non-coding upstream 230296 4706213 ~ 4707525 (-)
LOC111194275 NA non-coding upstream 276656 4752573 ~ 4754327 (-)
G139027 LOC107602621,LOC108268010,LOC107749088,LOC105907002,LOC106574506,LOC107678690,LOC102777581 non-coding upstream 345286 4821203 ~ 4838073 (-)
G139029 NA non-coding upstream 359865 4835782 ~ 4836531 (-)
G139003 NA non-coding upstream 362949 4838866 ~ 4854692 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other downstream 121572 4330871 ~ 4338197 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other downstream 598413 3847722 ~ 3861356 (-)
G138708 NA other downstream 626099 3832721 ~ 3833670 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 1284416 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 1345083 3095601 ~ 3114686 (-)
G139074 NA other upstream 800189 5276106 ~ 5276468 (-)
G139105 NA other upstream 854161 5330078 ~ 5330805 (-)
G139489 NA other upstream 1533136 6009053 ~ 6010867 (-)
LOC111194281 NA other upstream 1546692 6022609 ~ 6054733 (-)
G139487 NA other upstream 1829052 6304969 ~ 6374709 (-)

Expression


Co-expression Network