G280333


Basic Information

Item Value
gene id G280333
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 195171 ~ 195637 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU384825
CCTGACAGCACAGCTGTGAAATAAGGAACTATGGGGATTATTgtggatttatttttaatagtaatatttcTGCAGGGCATTCTGGGCCAAACTTTCACTCAGTCTGAATCTGTGGTTATAAAACCTGGAGAATCTCATAAACTGATCTGTACAGCATCTGGATTCACATTCAGCAGCTCCCGGGCAGCTGTGATCAGACAGGCTCCTGGAAAAGGACTGGAATGGGTTGCTACAATTTCAACAAGCAGCACTTACATCTACTATTCTCAGTCAGTTACGGGAAGATTCACAATCTCCAGATCTGACTCCAGCAGTCAGCTGTACTTACAGATGAACAGTCTGAAGAGTGAAGACACTGCTGTGTATTACTGTACCAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384825 True 380 TUCP 0.43 2 195171 195637

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 179030 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 38175 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 43137 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 44711 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 50943 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 90422 286059 ~ 287629 (+)
G280298 NA non-coding upstream 155503 38119 ~ 39668 (+)
G280297 NA non-coding upstream 157515 36371 ~ 37656 (+)
G280290 NA non-coding upstream 163638 22417 ~ 31533 (+)
G280334 NA non-coding downstream 11937 207574 ~ 207855 (+)
G280338 NA non-coding downstream 44717 240354 ~ 249052 (+)
G280345 NA non-coding downstream 57026 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 65240 260877 ~ 261488 (+)
LOC111190156 NA non-coding downstream 72048 267685 ~ 268169 (+)
LOC111190151 NA other upstream 1905 192775 ~ 193266 (+)
LOC111190163 NA other upstream 9665 184947 ~ 185506 (+)
LOC111190146 NA other upstream 14156 180028 ~ 181015 (+)
LOC111190164 NA other upstream 16989 177534 ~ 178182 (+)
LOC111190128 NA other upstream 19392 175181 ~ 175779 (+)
LOC103033165 NA other downstream 754 196391 ~ 196992 (+)
LOC103033487 NA other downstream 3923 199560 ~ 200089 (+)
G280329 NA other downstream 3929 199566 ~ 270848 (+)
LOC111190134 NA other downstream 6682 202319 ~ 202865 (+)
LOC111190135 NA other downstream 20297 215934 ~ 216572 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G183106 NA non-coding CI01000039 null 7348437 ~ 7348741 (-)