G280345


Basic Information

Item Value
gene id G280345
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 252663 ~ 254221 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU384845
attacaccttccctcaacactatcacacctttccactacaccttcccttaacaccattacaactttacattacacctttccattacaccttcccttaacatcaTTATACTTTCATTAAGATTCTAGGTCCTGAGAGACAGCGGTGTGTCCTCCACGTCTTTGTGGTGCATGTTTGAGATGCTCCGAAGTATGAAGTCCTCGGTGGCTGTCCCGTCACATTTCATGACTCCATCTGCACaagtagaaaaagacaaattagaaatctcagaaaatgttgaagatggccatttatttttgtcccacaacaaactattttaaattgccttatttatgtaatattcacataaacttacttcttcacactatggcttagctaacgctaagctaacggcgggaatacacatttaacacctgacgagaattatcgtgctgttttaattctcacacatcatattaagctattttaattatttttttcccacaacaaactattttaaattgccttatttatgtaatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384845 True 519 lncRNA 0.36 2 252663 254221

Neighbor

gene id symbol gene type direction distance location
LOC103040202 NA coding upstream 8118 240348 ~ 244545 (+)
LOC103041119 NA coding upstream 13313 238774 ~ 239350 (+)
LOC111190154 NA coding upstream 16085 233812 ~ 236578 (+)
LOC107197483 NA coding upstream 236522 15658 ~ 16141 (+)
LOC111190159 NA coding downstream 31838 286059 ~ 287629 (+)
LOC111190133 NA coding downstream 34358 288579 ~ 289221 (+)
LOC111190160 NA coding downstream 36112 290333 ~ 290884 (+)
LOC111190137 NA coding downstream 40083 294304 ~ 294920 (+)
LOC107197420 NA coding downstream 45448 299669 ~ 300531 (+)
G280338 NA non-coding upstream 3611 240354 ~ 249052 (+)
G280332 NA non-coding upstream 4964 191738 ~ 247699 (+)
G280334 NA non-coding upstream 44808 207574 ~ 207855 (+)
G280298 NA non-coding upstream 212995 38119 ~ 39668 (+)
G280297 NA non-coding upstream 215007 36371 ~ 37656 (+)
LOC111190165 NA non-coding downstream 6656 260877 ~ 261488 (+)
LOC111190156 NA non-coding downstream 13464 267685 ~ 268169 (+)
LOC103040519 NA non-coding downstream 16087 270308 ~ 270906 (+)
G280350 NA non-coding downstream 26835 281056 ~ 281292 (+)
LOC103040825 NA other upstream 20760 231279 ~ 231903 (+)
LOC103039884 LOC108275153 other upstream 23542 228575 ~ 229121 (+)
LOC111190153 NA other upstream 30709 221495 ~ 221954 (+)
LOC111190135 NA other upstream 36091 215934 ~ 216572 (+)
LOC111190134 NA other upstream 49798 202319 ~ 202865 (+)
LOC111190157 NA other downstream 18099 272320 ~ 276225 (+)
LOC111190162 NA other downstream 28054 282275 ~ 282898 (+)
G280341 NA other downstream 30221 284442 ~ 286535 (+)
LOC111190158 NA other downstream 30242 284463 ~ 285888 (+)

Expression


Co-expression Network