Gene
RNA
| Item | Value |
|---|---|
| gene id | G47410 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 10308880 ~ 10309101 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU53934 | True | 222 | lncRNA | 0.37 | 1 | 10308880 | 10309101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_10211545_10223229 | SMARCB1A, SMARCB1B, SMARCB1, SMARCB1.S | coding | downstream | 85044 | 10211431 ~ 10223836 (-) |
| CI01000006_10157899_10159258 | CHCHD10 | coding | downstream | 149622 | 10157847 ~ 10159258 (-) |
| CI01000006_10156167_10157125 | DDT | coding | downstream | 151755 | 10155884 ~ 10157125 (-) |
| CI01000006_10152518_10154866 | NA | coding | downstream | 154014 | 10151961 ~ 10154866 (-) |
| CI01000006_10144817_10151330 | P2RX4, P2RX4A | coding | downstream | 157550 | 10144817 ~ 10151330 (-) |
| CI01000006_10349084_10362629 | NA | coding | upstream | 39872 | 10348973 ~ 10363587 (-) |
| CI01000006_10372387_10387314 | NA | coding | upstream | 63028 | 10372129 ~ 10387602 (-) |
| CI01000006_10402704_10447782 | NA | coding | upstream | 93594 | 10402695 ~ 10449101 (-) |
| CI01000006_10453630_10483241 | NA | coding | upstream | 144512 | 10453613 ~ 10484006 (-) |
| CI01000006_10499329_10508831 | NA | coding | upstream | 190194 | 10499240 ~ 10509655 (-) |
| G47053 | NA | non-coding | downstream | 44560 | 10264081 ~ 10264320 (-) |
| G47035 | NA | non-coding | downstream | 76481 | 10232179 ~ 10232399 (-) |
| G47024 | NA | non-coding | downstream | 114239 | 10194432 ~ 10194641 (-) |
| G46986 | NA | non-coding | downstream | 291031 | 10017583 ~ 10017849 (-) |
| CI01000006_10016544_10031947 | FAM169AB | non-coding | downstream | 291504 | 10016375 ~ 10031947 (-) |
| G47444 | NA | non-coding | upstream | 209082 | 10518183 ~ 10520351 (-) |
| G47520 | NA | non-coding | upstream | 351914 | 10661015 ~ 10707544 (-) |
| G47544 | NA | non-coding | upstream | 422344 | 10731445 ~ 10732231 (-) |
| CI01000006_07500281_07507754 | NA | other | downstream | 2797924 | 7500246 ~ 7507976 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 3332008 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 5746812 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 5953452 | 4352510 ~ 4355428 (-) |
| G43102 | NA | other | downstream | 7374896 | 2908451 ~ 2933984 (-) |
| G47658 | NA | other | upstream | 721810 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 1341262 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 2025308 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 2041658 | 12569205 ~ 12582487 (-) |
