G77892


Basic Information

Item Value
gene id G77892
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 3297582 ~ 3348989 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU105040
ataactttatgctgctttactcctggtgcaaaaattcaagcagttcagtttggtttgatggcttgtgatcatccatcttcctcttgattatattcaaaagATTTTCAATCATAGAAACTTCTCAttgttaagtggtctcttattttttccccagagctgtacatgttcTATATATCAAGCTATGGaaacagtggcttgcaaaagtattcatgccCATTAaactttcacattttgtcaccttacaaccacaaacttaaatatatatttttgtatttattttaactaatagaccaacacaaattaGCACATCAGTGAGAAGtgatttaatcaaataaaaatctgaaaagtgtgatgtgccaACTTATTCAGCACCCCTTTATTCCGAAACCCATAAATAAAATCGAGTTCAATCAATTTCCCTTCAGAAAACAATTAATTCTTTAATagaatccagctgtgtgtaatttatttttagtgtgttGCGAACTAgcgaacaaacagcatcatgaagagaccaaggaactcaccagacaggtcagagataaagttgtggagaagaattttaaagcattaggttatgaaaaacatatcccaagctttgagcatcccaagtagcattgttcaatccatcatccaaagaTGGAAAAAGTAATCTATACCTGCAAACCTACTAAGACATGGTTCACccaactgacagatcgagcaaggagagcactggtcagagaagcagccaagaggcccatggtcactctggaggagctgcagaaattcaCAGCTCATGTGGAAGAATCAGTCCACAGGGCAACTATAATTCATACACTTTATGGAAAAGTGGGAAGTAGCAAGAAcaaaaccattgttgaaagaaagacacaagaagtgctgtttgtagTATGCTACAGGCAAACTGTACAGAATACAGCaaatgtggaagaaggtgcttcTTTGCGTTGGTCCATCACTTATTACTTCACAATAACActtgataaaatacatttaaatttgtggttgtaatgtgataAATTGTGAAAAGGCTCAACAGGTATTAATACTATATAAATGTATACCGACAAATCAAAGTTGGTACAAATAACCAGACACCCCAGCAATTTGTTCCTGTATTAATAGAGCTTTCATTTTAGCTTATTCCAAAGTTGATGCTGTTTCTCGTTTTGCTTCTGTATCACAGCAAATGCTGTATTTAGCTGATTGGTGTTATAGTTTGTCCTATATGCTGTTTTAGTTTGTAGTAAACCTATCGAGCTAGGCGGTTAATCGAGCACCATGATAACGTCTCCGGTTGCTCTGCAGGCTGTAGACCTTCAATACGCTGAAATCAGAATGCCGATTTCCAGGACCTGAACAAGGCCTCATGTGCTGTAACTGTTTCTCCTAAGCATGTTCTCTAATAGCTGCTGATATATTGTTACTGAttttgtaatgattaataataaaatcgaCTCTATTATCACAAGTTAAGACTTGGATCCTACTCATGAATTTCTCAATATCTAAATTTTCTATTATCGTACAAACTCCAGTACATAACGCTACCTTAGTGAAcatggggtaaaaaaaaaaaaaaaaaagagaccatgcTCTCTATCTGACACAAGTGCAGATATGTGCCAAAGACTACCATGATTTCACTCACGTCAAGTATTTAACTTGTATTAGTGTTATTAGGGACTTCCCTTACTTTCCCTATAGGTCAGACTTCAGTCTGTATCCCTTTAATAAAAGCCCTGAAAATACCCTCTAATATAAACCAGTACCCATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105040 True 1782 TUCP 0.36 2 3297582 3348989

Neighbor

gene id symbol gene type direction distance location
LOC103025229 acta1,act2,LOC105024319,LOC108430668,LOC102689871 coding downstream 392934 2900144 ~ 2904648 (-)
LOC103024903 LOC108430667 coding downstream 401901 2881109 ~ 2895681 (-)
LOC103025537 LOC108430628,LOC108269477,LOC107745352,LOC107711907 coding downstream 421946 2869496 ~ 2875636 (-)
LOC111193124 LOC108270491,LOC108234815 coding downstream 545326 2673416 ~ 2752256 (-)
LOC103025843 LOC103025843,LOC108430663 coding downstream 791709 2478136 ~ 2505873 (-)
strn3 strn3,LOC106611207,LOC107590905 coding upstream 532330 3881319 ~ 3909337 (-)
hectd1 hectd1,LOC107582380,LOC107733112,LOC107697712,LOC107719534,LOC107694830,LOC100380626 coding upstream 568667 3917656 ~ 3952193 (-)
heatr5a heatr5a,LOC108412624,LOC107697711,LOC107733168 coding upstream 607337 3956326 ~ 3991775 (-)
mis18bp1 NA coding upstream 645571 3994560 ~ 4006610 (-)
mdga2 mdga2,mamdc1 coding upstream 698074 4047063 ~ 4277821 (-)
G77891 NA non-coding downstream 254 3296348 ~ 3297328 (-)
G77888 tecpr2 non-coding downstream 12905 3270756 ~ 3284677 (-)
G77801 NA non-coding downstream 84429 3212929 ~ 3213153 (-)
G77779 NA non-coding downstream 190997 3106385 ~ 3106585 (-)
G77777 NA non-coding downstream 205954 3000586 ~ 3091628 (-)
G77902 traf3,LOC107719479,LOC107697656,LOC107590913 non-coding upstream 7541 3356530 ~ 3359703 (-)
G77912 NA non-coding upstream 45360 3394349 ~ 3394904 (-)
G77919 sptbn5 non-coding upstream 81176 3430165 ~ 3431406 (-)
G77941 NA non-coding upstream 165707 3514696 ~ 3515280 (-)
LOC111193169 NA non-coding upstream 223034 3572023 ~ 3620248 (-)
bmf bmf other downstream 90896 3175798 ~ 3206686 (-)
LOC103029757 LOC108430670,LOC108269994 other downstream 252819 2964024 ~ 3044763 (-)
G77656 NA other downstream 1106929 2190313 ~ 2190653 (-)
gchfr gchfr other downstream 1142234 2150788 ~ 2155348 (-)
LOC111193168 NA other downstream 1250341 2042959 ~ 2047241 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other upstream 296108 3645097 ~ 3714357 (-)
G78023 scfd1 other upstream 485573 3834562 ~ 3840570 (-)
G78083 NA other upstream 696445 4045434 ~ 4206384 (-)
G78297 kdm1a other upstream 1835803 5184792 ~ 5186358 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other upstream 3849920 7198909 ~ 7220854 (-)

Expression


Co-expression Network