G81197


Basic Information

Item Value
gene id G81197
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 16729820 ~ 16730174 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109415
ATTAAATGTAATCAGTCAtagaacagttaaaaaaataaatcaaaggaAGAAACAGGAATAAATGCCGAAGATTCGTCTTTATCAATGTAGTgaacacatgcaaaaaaatcagaacaggtaaataaaaaaatagacatcAGTTTGAATGTTTGTGCACAAACATCTGAAAGCAACTATGTTCCCTATATTAATAGGCTATAGTCCAACAGTCTtattaaagctaaaataaatgaaatgaatctTTGCTATGCATAAACCCTTTTTATCATAATCTGTACACACAATGTTTCCCATCTTCATAAAATCCCAaacaattaaatgaaataaatgaacataTACATGATCTACATGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109415 True 355 lncRNA 0.28 1 16729820 16730174

Neighbor

gene id symbol gene type direction distance location
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding upstream 754 16721225 ~ 16729066 (+)
LOC103021824 efr3b,LOC107697777,LOC107752767,LOC107592778 coding upstream 16779 16687918 ~ 16713041 (+)
ect2l NA coding upstream 121363 16594547 ~ 16608457 (+)
ccdc28a ccdc28a coding upstream 136247 16586187 ~ 16593573 (+)
tmem121 tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding upstream 190360 16518216 ~ 16539460 (+)
LOC103031040 fam150b,LOC108425626 coding downstream 30649 16760823 ~ 16767006 (+)
sh3yl1 sh3yl1,LOC107733179,LOC107594817,LOC107674108 coding downstream 52363 16782537 ~ 16838704 (+)
LOC103043735 id2,id2a,LOC107579075,LOC107707685,LOC106566577,LOC107655320 coding downstream 786798 17516972 ~ 17519541 (+)
asap2 asap2,LOC107707693 coding downstream 1024379 17754553 ~ 17876082 (+)
iah1 iah1 coding downstream 1167783 17897957 ~ 17902838 (+)
G81190 NA non-coding upstream 10385 16716995 ~ 16719435 (+)
G81124 NA non-coding upstream 47888 16678648 ~ 16681932 (+)
G81074 NA non-coding upstream 67204 16569003 ~ 16662616 (+)
G81220 NA non-coding downstream 110050 16840224 ~ 16845728 (+)
G81224 NA non-coding downstream 133937 16864111 ~ 16864542 (+)
G81243 NA non-coding downstream 249243 16979417 ~ 16982929 (+)
G81282 NA non-coding downstream 300889 17031063 ~ 17031359 (+)
G81288 NA non-coding downstream 363610 17093784 ~ 17093985 (+)
G80857 NA other upstream 1146489 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1526033 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 1894741 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 1926788 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 1931216 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 1297133 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 1729949 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 1781448 18511622 ~ 18520947 (+)
G81704 NA other downstream 2200064 18930238 ~ 18930754 (+)
G81761 NA other downstream 2935562 19665736 ~ 19666047 (+)

Expression


Co-expression Network