G86687


Basic Information

Item Value
gene id G86687
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 39571036 ~ 39577140 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU116728
CTGGCTCTAGGCCGTGACAAATGAATGGAAgacacacagtgtttaaatggcaaaaaatataaatttaatgaaGAAATTAGAAAAAGGTTCATGtccagacatttataaacaaaaaggcGGCCCAAAGAAAACCTACGtatcaacaaaaaacaactaaagCATAATGTCAAACAGAACCAAACCAAGCAGGCCCAGAAAACTGAGCTGCCTGcagcaaacagaacaaaagaaaggCCTCCCGCAGCACACCTACACAGGTGCATATATTGATTAGGTCTGTAGCCCCACCCCCTAACACCCAATCAGGGGACAGGCACGTcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116728 True 323 lncRNA 0.43 2 39571036 39577140

Neighbor

gene id symbol gene type direction distance location
LOC103031521 flrt2 coding downstream 514239 39045638 ~ 39056797 (-)
LOC103041717 galc,LOC108444013,LOC108269778,LOC107372531 coding downstream 689082 38862143 ~ 38881954 (-)
ak7 NA coding downstream 714036 38836859 ~ 38857000 (-)
LOC111193258 NA coding downstream 789748 38772028 ~ 38781288 (-)
vrk1 vrk1,LOC106602366 coding downstream 872705 38665125 ~ 38698331 (-)
gsc gsc,LOC107750880,LOC107668603,LOC107671116,LOC107717065 coding upstream 108670 39685810 ~ 39692043 (-)
clmn LOC107583621,LOC102791389 coding upstream 297112 39874252 ~ 39940026 (-)
syne3 NA coding upstream 419374 39996514 ~ 40065403 (-)
LOC103047513 gabrr2a,LOC108435431,LOC108269496,LOC103368039,LOC103138775,LOC107755784 coding upstream 493731 40070871 ~ 40120053 (-)
LOC103047828 rragd,LOC108435430,LOC107755772,LOC107583676,LOC107693082,LOC108270433 coding upstream 578495 40155635 ~ 40194943 (-)
G86663 NA non-coding downstream 33371 39537389 ~ 39537665 (-)
G86656 NA non-coding downstream 93663 39477055 ~ 39477373 (-)
G86646 NA non-coding downstream 132998 39437726 ~ 39438038 (-)
G86632 NA non-coding downstream 241958 39328781 ~ 39329078 (-)
G86625 NA non-coding downstream 283122 39285264 ~ 39287914 (-)
G86709 NA non-coding upstream 62588 39639728 ~ 39704796 (-)
G86809 NA non-coding upstream 144175 39721315 ~ 39759441 (-)
G86813 NA non-coding upstream 161533 39738673 ~ 39861059 (-)
G86821 NA non-coding upstream 308371 39885511 ~ 39933138 (-)
G86834 NA non-coding upstream 390631 39967771 ~ 39968804 (-)
G86432 NA other downstream 1501984 37982874 ~ 38069052 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other downstream 2469455 36588904 ~ 37101581 (-)
G85902 tfb1m other downstream 4276002 35288232 ~ 35295034 (-)
daam2 daam2 other downstream 5099431 34274391 ~ 34471605 (-)
rbks rbks,LOC107553733,LOC107656748 other downstream 5558474 33955195 ~ 34012562 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other upstream 230990 39808130 ~ 39858569 (-)
LOC111193261 NA other upstream 956228 40533368 ~ 40536334 (-)
LOC103044865 NA other upstream 1185532 40762672 ~ 40770501 (-)
LOC103040189 NA other upstream 2195927 41773067 ~ 41804888 (-)

Expression


Co-expression Network