CI01000009_01293719_01294750


Basic Information

Item Value
gene id CI01000009_01293719_01294750
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1292716 ~ 1294963 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01293719_01294750.mRNA
AAAAACACTTACTAACTTAGTCACATCACTATCCAATTCAAAGAGAGACAGACAATCAAACTTGCTGTGAGTATCAGACATTTAATGTGACTTTTTTATGTGTAATCTTTTGGATCACTATATATATATATATAATAGAGCAAGAATATGAATATTTAATTTTATTGAACATTTTTAAACCAAATTTCTATTTCCCCAAACAATCTCAGGAACATGACAGATCAAAGTCGACTGGAATTTCAGGCGATGCCAATGAATGACAGCTATACAAACCAGACTTGCGATGTTTTCATCTACAAGGAGTCTGCTAGGATCCTCTTCCCCATTTTCTACTGCCTGGTTTTTTTCATCAGCGTGGCAGGTAACAGCCTGGTCCTCTGGATCACCTGTCAGAAAAAGCAGAAGATGAACTCCACCACGATATATCTGATCAACCTGGCCATCTCCGACACCCTCTTCACCTTGGCTCTTCCAGGCAGGATCGCATACTACATCCGAGGCTTCGACTGGCCATTTGGAGATTTCTTGTGCCGGCTGACTGCCATGATCTTCTACAGCAATACCTATGCTAGCATCGCCTTCATGACCTGCATCAGTGTGGATCGCTACTTGGCCATGCTGCACCGTCAGCGGTGTCAAAGACTGAGGAAAACCAAGGTCGTGCGAGGTATCTGTGCTCTGGTATGGGTGGTGGTTCTCCTTGAGACATCCCCACTGCTCTTCAAAAGCACCATGGAAGCCAGACCCGGTCATCGAACGTGCATGGAGTTCTCCAATTTTGATGGCCACAAGATGGCATACGGTCTTCTGTTTGCCTGTGTCATTGGGTTTTGCATGCCACTGGGACTCATCCTGTGCTGTTACAGCCGGGTCAATTGCAAGCTCTACAAGACGGCCAAGGAAAACCCGGTGACCAACAAGTCTGGAAGCAACAGCAGGGCCAAAAATATGATTCTGCTCATTCTGCTGAGCTTCGTGGTGTGTTTCAGCCCTTACCACATCAACATCATGCAGTTTGCAGCGAGAAGGCTGTACCATGAGCCCTCCTGTGAGGAGTTAAAGACTTTAAAAATGTCCCTGCAGGTAACCGTTGCCATGATGAACTTTAACAGCTGCCTCGACCCTCTTATTTACTTTTTTGCCATCAAAACATACAAGCAGAGAGTGATGAGTCTTTTTAAGAGCTACATTTCCATTTCGGCATCTTCCAAGAGCATGCAGGAGAACAGCAGCAGTAACACATGAGGACAAATATTATACAAAGTAAAATCAGATGGTGGAAACTGCAGAGGAAATGCCTGCACACGTGTGAAAATGTGGTTGGATTGATTTAGACGGCAGAGACATAGTTACCTTTTATTTTTAAGCAAATTTCTTACCATTTAATGGGCTTTGAATCCATGATATTTGATTTGTTTTGGGATTTTTGACCACATTTGTTGTGTGAATTTATTAAGATCACTGACATACTCTTGTCATTTAGCACATTTTTTGTGAGGTCAGTGTGAATTTGCAGATTAATTTTTTTGTGTATATATTTTTTTTGTGAATGATTAATGTGCTGTTGGATTCTCTCTTTTTTTACTCGGTCATGTAGGCCGGTCATTGACATCAAATGAAATTCAGAGACTAAAAATAATGGTTAATTATTAGGCATTTATTAATCTTAGTCAATGTTAATTTCAACATTTACTAATAGGCTACATTATTAAAATCAAAAGTAATGCACTGTGAACTAACACGAACAAACAATGAACGATTGTATTTTTATCAACTAACATTAATAAAGATTAATAAATACTGTAAAAAAAAAAAAAAAAATGTATTGCTCGTTGTTAGTTCATGTTAGTTAATGCATTAACTAATGTTAACAAATGAGACCTTACTGAAAATTGTTACCAGAGTAATTAATTAAGTGGAAAAATCCCACATAAATGTCAAAGAGGCTAGAAACTAATAGACATTTCTGAGTAAGAGTGATGTAGGTGTATTTTAATACCTATTGACATTTCTGTAAGCTGCTGTGTGAATACTGTGTTTTGCTTTAAAGATGCTCAAAATGTGTGTGTAACATTTTGAGCAACCTCTATAATGACATTTTCCATTTGGGAATTAAATGCTTATGTAGCTGCCAATTGCCCTAAACAACTTGCTTTAAACCTGTTTTTGAATACAAAATAAAAATTAAAAAAAAAATCATTATCAAGTTGTTGCATTTTGAATCACTTATCATCTCTAAAGAAATAAA

Function

NR:

description
Si:ch211-184m13.4

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04305 EBI2; Epstein-Barr virus induced gene 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01293719_01294750.mRNA True 2248 mRNA 0.38 1 1292716 1294963

Neighbor

gene id symbol gene type direction distance location
CI01000009_01264011_01272894 GPR183A coding downstream 19376 1263607 ~ 1273340 (-)
CI01000009_01257207_01258196 GPR18 coding downstream 34520 1256477 ~ 1258196 (-)
CI01000009_01208525_01212914 NA coding downstream 78199 1208374 ~ 1214517 (-)
CI01000009_01138569_01164523 NA coding downstream 128179 1138249 ~ 1164537 (-)
CI01000009_01128947_01131135 NA coding downstream 161555 1128884 ~ 1131161 (-)
CI01000009_01327537_01337349 NA coding upstream 32349 1327312 ~ 1337846 (-)
CI01000009_01386589_01389680 NA coding upstream 91414 1383864 ~ 1390149 (-)
CI01000009_01394603_01397604 ZIC5 coding upstream 99595 1394558 ~ 1398473 (-)
CI01000009_01423940_01424233 NA coding upstream 128748 1423711 ~ 1424573 (-)
CI01000009_01541031_01546978 NA coding upstream 245931 1540894 ~ 1547804 (-)
G52096 NA non-coding downstream 8809 1283543 ~ 1283907 (-)
G51951 NA non-coding downstream 22691 1267951 ~ 1270025 (-)
G52094 NA non-coding downstream 26104 1266178 ~ 1266612 (-)
G52091 NA non-coding downstream 48472 1242744 ~ 1244244 (-)
G52089 NA non-coding downstream 51109 1241261 ~ 1241607 (-)
G52102 NA non-coding upstream 10306 1305269 ~ 1315480 (-)
G52160 NA non-coding upstream 131111 1426074 ~ 1431565 (-)
G52157 NA non-coding upstream 151531 1446494 ~ 1450926 (-)
G52244 NA non-coding upstream 394109 1689072 ~ 1703392 (-)
G52098 NA other upstream 106969 1401932 ~ 1407627 (-)
G52410 NA other upstream 1256761 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1588725 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 1966240 3261038 ~ 3262843 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037922 si:ch211-184m13.4 coding NC_007120.7 CM002893.2 31134907 ~ 31136008 (-)