CI01000009_02327693_02335035


Basic Information

Item Value
gene id CI01000009_02327693_02335035
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 2327693 ~ 2335035 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_02327693_02335035.mRNA
ATTACCTCTGATCATCTGGCTAATCAAGTGCCACTGATAGTCCAGTACCACATACTGGACCAGTACATCTCTCAGCTTCAGAATGCAATGCTTGCCATGATTGGAAGGAACAATCCAGGAATGCTGCTTCAAGAAGATTCTGATGTTGCACTGACTCCGAAGAAGGCAGTGGTTCTTCAGCGCACTCCTCCATGTCCTTCTCATCACTCCGCACCATGTTTGCTCTGCGCTCGCTGTTCCGTACTGCGCACTTCAGATATGCGGCTGCTGCTCAGTTTCATGCATCTTCAAACTGCAGTGGCGCAAAAGTCGCTGTTAATCCTTGTGCATCTAAGTCGGGAAGGTGCAGAGGTTCAGATGTTTGCTCCCGATGTGTCTCAGATGCATGTGATAGACCACGGCAAAGGTCAGCCAGCGGAGACTGAGTCAAGGAATGTCTTGTCAGAATCAGCGCGCATTGCAAGAGGCAACATCACTGACCTGGCAAAACTGAGTGCCAGTAATCATGATGCGGTCATCTTCCCTGGTGGTTTCGGTGCAGCTAAAAACCTTTCAACATTTGCTATTGATGGGAAGGACTGTAAGGTGAATAAGGACGTGGAGCGGGTTTTAAAGGACTTCCATAAAGCAGGAAAGCCAATTGGGTTGTGCTGTATATCTCCAGTGCTGGCGGCGAGAGTTCTCCCTGGTGTGGATGTGACGGTGGGTCACGAGGAGGAGGAAGCGCATGTGGACCAGAAGAATAAGGTGGTGACCACACCTGCATTCATGTGTGAAACAAAGTTGCACTTGATTTTTGATGGGATTGGTGCTATGACTAACAGGATTAGTCACACGACTAGCTACAGGCACCGATCATCATATGGCATCACGCAAGGCTACACGCACCTCAAAGAGACCTGTGGTCTGCCCACACAGACTCATTTCCTGAGCACCCACACGCATCTTATTGAGGCACGGCCTTCTTTGATGGGGATTTCTCCCACCCACCTCTCATCAGCCTACCCACTTCCCACATCCTTCCAAAGAGGCTGGGCAAACAAGACCCCGCGTTCTGCCAATTTGTTCGTACAAAACGTGGGGATTTGGGGGCCTGCAGACACTCTTACACAGACAAATG

Function

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_02327693_02335035.mRNA True 1120 mRNA 0.50 9 2327693 2335035

Neighbor

gene id symbol gene type direction distance location
CI01000009_02300395_02301213 OLIG2 coding downstream 26056 2300109 ~ 2301637 (-)
CI01000009_02286191_02288884 OLIG1 coding downstream 38712 2286160 ~ 2288981 (-)
CI01000009_02251416_02262823 ERCC1 coding downstream 64870 2251161 ~ 2262823 (-)
CI01000009_02247894_02249252 NA coding downstream 78407 2247774 ~ 2249286 (-)
CI01000009_02239426_02240738 NA coding downstream 86897 2239421 ~ 2240796 (-)
CI01000009_02352214_02356619 NA coding upstream 17179 2352214 ~ 2356841 (-)
CI01000009_02358636_02361913 HPX coding upstream 23435 2358470 ~ 2361949 (-)
CI01000009_02391182_02393863 NA coding upstream 55410 2390445 ~ 2393863 (-)
CI01000009_02403219_02417215 FAM160A2 coding upstream 68121 2403156 ~ 2417215 (-)
CI01000009_02591882_02593586 RPL8.S, RPL8 coding upstream 256828 2591863 ~ 2593761 (-)
G52342 NA non-coding downstream 112158 2214952 ~ 2215535 (-)
G52338 NA non-coding downstream 169947 2157412 ~ 2157746 (-)
G52230 NA non-coding downstream 231641 2094368 ~ 2096052 (-)
G52222 NA non-coding downstream 335707 1990621 ~ 1991986 (-)
G52274 NA non-coding downstream 351865 1974202 ~ 1975828 (-)
G52371 NA non-coding upstream 53279 2388314 ~ 2388539 (-)
G52328 NA non-coding upstream 64779 2399814 ~ 2400894 (-)
G52330 NA non-coding upstream 66000 2401035 ~ 2401380 (-)
G52378 NA non-coding upstream 92214 2427249 ~ 2427848 (-)
G52379 NA non-coding upstream 113331 2448366 ~ 2451640 (-)
G52098 NA other downstream 920066 1401932 ~ 1407627 (-)
G52410 NA other upstream 216689 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 548653 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 926168 3261038 ~ 3262843 (-)
G52828 NA other upstream 1882385 4217420 ~ 4231469 (-)
G53515 NA other upstream 3167360 5502395 ~ 5505248 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location