CI01000009_04866883_04867968


Basic Information

Item Value
gene id CI01000009_04866883_04867968
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 4866751 ~ 4873730 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_04866883_04867968.mRNA
TTTTAAAAACCCATTAATGACAGGTTATGACACCTCTTTTTGTCTGCTAACCTACATCGTAGCATGTTTAAGGTCATCTATTTGTGTGACTCAGAAGACACTAAAAATCAGTTTTTCTCTTTCAGGCTCATCATGGAGACCACAAGTCCCACCACCACAGAAAAGAAGGAATGCAAGGGATCAGGCCTGGATGGCAGTAGTTTCTCAGACCTTCCCAAAAAGCCCTCACCGACCACAGCATCTCGAGAGTATAAATGTTATAAATTTCTTAAAGCTTCAGGGAGAGCAGTGGACTGCGCTGTCCATCTGACAAACATGAAGATGGTGAAAGACCTTTGAAATGCTAATGACCTGCTCATATTATGGCATCGTACTGTTTAATGAGGGGTTTGGTGGCCTGCCATAAGAAAGCAATGATCATAAATTGTTTAAGACAAAAGGAGAAATAGGGCATCGGTGTACCCGGTCTTCAGAAGGGTGTTATTTTTTGTCTCGGTGTATGATGTTGTGGGTTATTTTGAATGTGAAAAGAGTTCTTTTACATATTTAAAACTCAAAAAGTATGATAATAGGAAATACTCAAAGAATAGTAATTCATTTCGTTAGTTGCCTGCTGAAAAGGCTTTTGAATACGAAACTCAATGATGGTGAAGGACCTTGTTCTCACCACTGGAGACCAGAAGTTATGTATTACTAATCACGGCTGTCTGAACTTGTTAGCATCATGGTTTTTGGCCGTCAGGGTCTGTGCTGAGATAGTAATGTAGTTTATCATTGTATGACATACTTTAATAGTGTTGGGTGACACCAATATTGTTGGCCTGCCATAGGAATTTGATGTAAAGAAATGAATTTTCATAATACATTCTGGCTGTTGTTGATGCTGCAATTCTGTGTAGCATCATGCTCATATAACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_04866883_04867968.mRNA False 920 mRNA 0.39 2 4866751 4868549

Neighbor

gene id symbol gene type direction distance location
CI01000009_04763889_04769573 INHBB coding upstream 96922 4763320 ~ 4769829 (+)
CI01000009_04758013_04761749 NA coding upstream 104912 4756351 ~ 4761839 (+)
CI01000009_04462240_04659526 LRP1BA, LRP1B coding upstream 206016 4462240 ~ 4660735 (+)
CI01000009_04435947_04448679 NA coding upstream 418024 4434699 ~ 4448727 (+)
CI01000009_04261520_04263271 NA coding upstream 603326 4261116 ~ 4263425 (+)
CI01000009_04897197_04933164 GLI2, GLI2A coding downstream 27858 4896407 ~ 4933242 (+)
CI01000009_04965404_04975323 SLC15A2 coding downstream 96855 4965404 ~ 4975386 (+)
CI01000009_04987804_05029077 DIRC2 coding downstream 119255 4987804 ~ 5029077 (+)
CI01000009_05102641_05105265 NA coding downstream 234033 5102582 ~ 5105811 (+)
CI01000009_05106385_05110040 NA coding downstream 236398 5104947 ~ 5110141 (+)
G52981 NA non-coding upstream 33144 4832803 ~ 4833607 (+)
G52972 NA non-coding upstream 47509 4818997 ~ 4819242 (+)
G52971 NA non-coding upstream 48256 4818097 ~ 4818495 (+)
G52970 NA non-coding upstream 52689 4813749 ~ 4814062 (+)
G52969 NA non-coding upstream 53745 4812573 ~ 4813006 (+)
G53219 NA non-coding downstream 69308 4937857 ~ 4938140 (+)
G53223 NA non-coding downstream 74783 4943332 ~ 4943655 (+)
G53242 NA non-coding downstream 116983 4985532 ~ 4987123 (+)
G53255 NA non-coding downstream 175353 5043902 ~ 5044161 (+)
G53256 NA non-coding downstream 175739 5044288 ~ 5044504 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 1657767 3202207 ~ 3208984 (+)
G51529 NA other upstream 1804164 3062033 ~ 3062587 (+)
G51274 NA other upstream 2516265 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 2965325 1897343 ~ 1919516 (+)
G51122 NA other upstream 3184785 1680146 ~ 1681966 (+)
G53388 NA other downstream 653693 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 991753 5931718 ~ 5943899 (+)
G53651 NA other downstream 1377015 6245564 ~ 6248392 (+)
G56100 NA other downstream 4260751 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 4984810 9853929 ~ 9856587 (+)

Expression


Co-expression Network