CI01000009_06943591_06952628


Basic Information

Item Value
gene id CI01000009_06943591_06952628
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 6941624 ~ 6953067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_06943591_06952628.mRNA
CTATATAAAGAGGTATATAGTAAGCGTGTGTGGGAAGTGAGCCGTGAGTTTTTCCGTGGTGTTTTCTCAGCTCCAATCATTACCACTGCGGAAATGCTAATGGCTGTTTGAATAAGAGCAGGTTCGAGGGGGCACTGGGGGCTCAAGGCTTTGTTTGACTTGCTGATCCTGTCTGCCCGGCGGCTCTCAGACGCTGTTGTTTTTAAATTACGTAGGGGATATTGCTGGCCAGGCAAAGATATACAAGTGGAAGCCCAATGCTTTTAAAAACCACGGGAAAAATGCTGAACGTTACAAATTATAAACCCTTGTCTTCAGCTCGCCTCTCGCCACAAATGATTTATGTTTGAAATAATATTGCTACAAATCACTTCTGCGAGGCCTCCGATGGGCCAGCCTGTTTTTGGACTTAGGAGTAATGAGGGATTAGACAAAGTCTCGGGTCCTGTTACGCTATAGAAACCTTACATGTGGAGACAAACACTTCAGTGAGAAGTTATACTTTCTATAAGCCTGTACATATGATGTAAAGATATTCATAATGCCTTATCATATACATCGCAATCCCACAATTTAATTACTTTATAAACTTATAAAACCTGTAAACACATGATATCACTGTTGTTGATCATGTGTTTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTTATTTCTCACCCTTATGGCGTTCCACACCCGTAAGACCTTCGTTAATCTTCGGAACACAAATTAAGATATTTTTGTTGAAATCTGATGGCTCAGTGAGGCCTCTATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATATATGCGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGTGCCAAAAAAAACAAAATAACGACTTATATAGTGATGGCTTATTTCAAAACACTGCGTCAGGAAGCTTCGGAGTGTTATGAATCAGCGTGTCGAATCAGCGGTTCGAAGCGCCACAGTCACGTGATTTCAGCAGTTTGGCGGTTTGACACACGCGATCCGAATCATGATTCGATACGCTGATTCATAACGCTCCAAAGCTTCCTGAATTAGCGTTTTGAAATCGGCCATCACTATATAAGTCGTTATTTTGTTTTTTTTTGGCGCACCAAAAATATTCTCGTCGCTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGAAGGCCTCACTGAGCCATCGGATTTCATCCAAAATATCTTAATTTATGTTCCGAAGATGAACGAAGGTCTTACGGGTGTGGAACGGCATGAGGGTGAGTAATAAATGACATTATTTTCATTTTTGGGTGAACTAACCTTTAATGTTGTTTGAATTTGTTGTTGATCCGGTGTTTTAATACTTTAACATTGTTTTAAAAATTGTAAATATGCATATAACTATGACCATGATTAAAACTGATTATATGGTGTATTAAATGGCATTAATGTGTGGCAATGCTTTAAAGGGATAGTTTAAAGTAAAATAAAATAAAGTGACTTTTATTGTATAGACAAAAAAAAAAAAAAAAAAGTTGAAATATGCATCAAAATATCTTTGTTTGTTTTTTTTGTGTGTGTGTGTTTCGCAGAAGAAAGAAAGAATGAAATAGTTCCAAATTTGGAATGACGTGAGGGTGAACAAATTACAGATTTTTTTTTACTTTTGGGTGAACTAACCCTTTTAGTATAGCTTTGTAATGTATTATATACAGAAAGTGCTACCAAAAGGAATTTTGCCCTCCTGCTTTCTCACAGATTATTATGACCATAAACTTTAATATCTTCTGAAAGGGCGCACAGTATTTCATTAGAGTGGAATGTCCAGCTACTCAATGGAAGAGCGCTCTCACTAACATGATAAAGGATGTGTTTTGGACAAACCGACTCAGCCGAGCAGAACCACATACATCCCTAATTATCTCTCACCGCACCATTACATCCAGGAATCTAAACAATAGAGATCATGTTTATTTGCCCGGCTGTGAGGTGAAAGCATGTCTGGTTCTCACTGTGCTGTTGTGTTTTCTTCAGGAGGTCACAGAGATTAATGAACCTGAAATAACTCCTGTTAGCAGGCTCCAAGGGGGATGGACGCTGCTGTCCGTGCCTGAGGTGAAGGCCCCTCACTGGGCAGAGGATGCAGCAGCAGTGGGGTTGGAGGTTAAAGTTGAGACGCCTCTTTTGTCCTCACATGTCACAACACTGTTAACCAACAGCTGCTGCAGAAAGGTCTTATGGGAATGCCTTCCTTATACCTGTGCTAAAAGCTTTTCCTTCAGACAGAAAATCTCAAACACCTTTTCTTTCCCTTGGGAAGACTTTGTTCTGAAGTGCTCTGGGATCATTGTTGTGGCTCTCCTTCAAGCGTGTTTCATTTTTAAACAGTTTCCTCTCTGTGATGCTCTCAGATATGCTTGTCTCTCTGAGAAGGCCGATAAACAGACAAACTATTTAACCGGCGAAAGACAAGAGATTTTTAGTGTGATCGCAAGTCAAAGCCATATGTTCTCCTCTCTCTTTCTCTCCCCCTCGCTAATGAGTGTATTTCTCAGCTCCTCTGCGGATTAGGCGTGCAAAGAAAGAGTGAAGGAAAGAAAAGATCCAATTGAGAGACGGCGAGGTCCGCCGAGCTCAATGGGAGAGAAAAGCGGGTGAGAAAAAGGGGGCGAGAGGTAGAATGGCATGATCTGCAGGGGGCAGACCCTCACTCCAGGACCTTCCTCTCTTTCTGTCGTCTCTTTTTCCCCCTGTCTTCCTCCGCTATGCCTTTGGGATTCAAATGCCGTCTCATTAGTTTTTATTGGATTGAAATGTTTCGCGAGGTCCGCGTTCACGTAGGGTTTGGTGGTGGGATTCGAGAGGCTAAGAGTGCACCAAATAAGTTGTATCCTTTTGCCTTTCTTTCGCTCGGCTTTTCACAAGCTCATTCCCATCCCTCCTTCTGCGCCTGCTAATTGTGCTGTCGTCTTCACGCTTCAATTTGCGGTGAAACCGCTTAGAAGTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_06943591_06952628.mRNA True 3120 mRNA 0.41 6 6941624 6953067

Neighbor

gene id symbol gene type direction distance location
CI01000009_06212264_06213131 NA coding upstream 727809 6212264 ~ 6213815 (+)
CI01000009_06205817_06207701 TEX30 coding upstream 733913 6205817 ~ 6207711 (+)
CI01000009_06195742_06204011 KDELC1 coding upstream 737275 6195742 ~ 6204349 (+)
CI01000009_06130188_06193279 STXBP5L coding upstream 748220 6130064 ~ 6193404 (+)
CI01000009_06002120_06017019 GTF2E1 coding upstream 923842 6002120 ~ 6017782 (+)
CI01000009_06975071_07009147 ARHGAP15 coding downstream 22004 6975071 ~ 7009417 (+)
CI01000009_07051811_07054331 NA coding downstream 97651 7050718 ~ 7054625 (+)
CI01000009_07091022_07092696 NA coding downstream 137851 7090918 ~ 7092801 (+)
CI01000009_07101768_07105835 NA coding downstream 148202 7101269 ~ 7106009 (+)
CI01000009_07111833_07115320 NA coding downstream 158655 7110351 ~ 7115443 (+)
G54626 NA non-coding upstream 832 6896121 ~ 6940792 (+)
G54627 NA non-coding upstream 28028 6805307 ~ 6913596 (+)
G54433 NA non-coding upstream 308846 6632544 ~ 6632778 (+)
G53903 NA non-coding upstream 364482 6576716 ~ 6577142 (+)
G53901 NA non-coding upstream 371011 6570411 ~ 6570613 (+)
G54694 NA non-coding downstream 4652 6957719 ~ 6957928 (+)
G54752 NA non-coding downstream 167428 7120495 ~ 7120779 (+)
G54779 NA non-coding downstream 203814 7156881 ~ 7157158 (+)
G54946 NA non-coding downstream 248623 7201690 ~ 7201927 (+)
G53651 NA other upstream 693232 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 1008823 5931718 ~ 5943899 (+)
G53388 NA other upstream 1402570 5522242 ~ 5540638 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 3732640 3202207 ~ 3208984 (+)
G51529 NA other upstream 3879037 3062033 ~ 3062587 (+)
G56100 NA other downstream 2176233 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 2900292 9853929 ~ 9856587 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 4807719 11761606 ~ 11766944 (+)
G57811 NA other downstream 4980875 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 5479491 12432538 ~ 12436017 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location