G9358


Basic Information

Item Value
gene id G9358
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 9808998 ~ 9809231 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU12692
CTTAACTAAACTGGAGACATATCAAAGCTGCGCTACGTTACATGCTTAACCTGTGTCCACAAATAGAGTTTACctttctgaaagtcttggtggTGAGAGAAATGCCTCATAATGTACGCTGTGTTTATGTTCCGCTGATTTTATCACACATAGTTTGcgctgagttttgttctccagcgcagctaaacttttcccagtgtttattacggttagcgggagagacgctgtttaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12692 True 234 lncRNA 0.41 1 9808998 9809231

Neighbor

gene id symbol gene type direction distance location
tom1l2 tom1l2 coding downstream 7867 9761047 ~ 9801131 (-)
srebf1 srebf1 coding downstream 52907 9726681 ~ 9756091 (-)
LOC103023040 nptx2,nptx2a,LOC107724745,LOC107713953,LOC107665931,LOC107573982,LOC108275595 coding downstream 718049 9076288 ~ 9090949 (-)
LOC103022733 LOC108412765,LOC108276911 coding downstream 788313 8934800 ~ 9020685 (-)
LOC103030324 LOC108412777 coding downstream 890660 8886138 ~ 8918338 (-)
tbl3 tbl3,LOC100195964 coding upstream 45242 9854473 ~ 9883788 (-)
LOC103027572 LOC105910934,LOC103366175,LOC102289484,LOC102197495,LOC101481562,LOC100706198 coding upstream 131539 9940770 ~ 9972114 (-)
LOC103027763 LOC108432239,LOC107672452,LOC107711237 coding upstream 504129 10313360 ~ 10453819 (-)
LOC103028714 LOC108432238,LOC108277388,LOC106606311 coding upstream 649973 10459204 ~ 10466183 (-)
LOC107197110 LOC108432236,LOC108277373,LOC105898716 coding upstream 659966 10469197 ~ 10554323 (-)
G9347 NA non-coding downstream 134520 9673966 ~ 9674478 (-)
G9287 NA non-coding downstream 243253 9565404 ~ 9565745 (-)
G9284 NA non-coding downstream 307672 9500516 ~ 9501326 (-)
G9264 NA non-coding downstream 346303 9462485 ~ 9462695 (-)
G9262 NA non-coding downstream 346860 9461377 ~ 9462138 (-)
G9366 NA non-coding upstream 11947 9821178 ~ 9822014 (-)
G9343 gid4,LOC107724729,LOC106601817,LOC107555661 non-coding upstream 13078 9822309 ~ 9832303 (-)
G9464 NA non-coding upstream 564738 10373969 ~ 10375655 (-)
G9465 NA non-coding upstream 568471 10377702 ~ 10378656 (-)
G9467 NA non-coding upstream 576779 10386010 ~ 10387292 (-)
G9350 rai1 other downstream 98597 9709792 ~ 9710401 (-)
G9285 NA other downstream 304535 9503908 ~ 9504463 (-)
cacng4 cacng4b,LOC108412836,LOC107691234,LOC107565862,LOC107713946,LOC108259704,LOC107548710 other downstream 1056937 8674912 ~ 8752061 (-)
LOC103040571 c16orf52.L,c17h16orf52,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 other downstream 1388624 8379399 ~ 8420374 (-)
nags nags,LOC102299446 other downstream 1440530 8348110 ~ 8368468 (-)
LOC111194270 NA other upstream 411925 10221156 ~ 10225490 (-)
G9469 NA other upstream 584231 10393462 ~ 10395480 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other upstream 1530909 11340140 ~ 11344262 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other upstream 1866923 11676154 ~ 11678108 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other upstream 3003794 12813025 ~ 12817186 (-)

Expression


Co-expression Network