G208046


Basic Information

Item Value
gene id G208046
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26212058 ~ 26212841 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282385
atggagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgtgagtgttatggagtgcgagtgttatggagtgtgaGCGTTATGGAGTGTGAGAATTTAGGGGTGAAtaagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGTGAGAATTTAGGGGTGTATAAGTGCGAGTGTTAtgagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGTATTTAAGGGTGTATAAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGACTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTgtggagtgcgagtgtt
>TU282386
TAtaagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGTGAGAATTTAGGGGTGTATAAGTGCGAGTGTTATTGAGTGCGAGTGTTATTGAGTGCGAGTGTTAGGAGTGCGAGTGTTAttggagtgcgagtgttatggagtgcgagtgttatggagtgtgaGCGTTATGGAGTGTGAGAATTTAGGGGTGAAtaagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGTGAGAATTTAGGGGTGTATAAGTGCGAGTGTTAtgagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGTATTTAAGGGTGTATAAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGACTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTgtggagtgcgagtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282385 False 568 TUCP 0.51 3 26212058 26212841
TU282386 True 656 TUCP 0.50 2 26212058 26212769

Neighbor

gene id symbol gene type direction distance location
LOC111195834 NA coding downstream 112231 26096805 ~ 26099827 (-)
LOC111195867 NA coding downstream 116867 26092170 ~ 26095191 (-)
LOC103040521 NA coding downstream 526447 25681230 ~ 25685611 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding downstream 639787 25496301 ~ 25572271 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding downstream 759967 25412186 ~ 25452091 (-)
LOC111195836 NA coding upstream 31407 26244248 ~ 26246421 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding upstream 401021 26613862 ~ 26640223 (-)
cep290 cep290 coding upstream 460765 26673606 ~ 26715253 (-)
kitlg NA coding upstream 579921 26792762 ~ 26815459 (-)
LOC111195856 NA coding upstream 733453 26946294 ~ 26949370 (-)
G208042 NA non-coding downstream 42252 26163915 ~ 26169806 (-)
G208030 NA non-coding downstream 55012 26127107 ~ 26157046 (-)
G208029 ca5a,LOC107583128,LOC108268921,LOC107701525,LOC107654151,LOC107581837 non-coding downstream 56790 26134586 ~ 26155268 (-)
G208027 uba2 non-coding downstream 87290 26123347 ~ 26124768 (-)
G208026 uba2,LOC107701803 non-coding downstream 89691 26121477 ~ 26122367 (-)
G208047 NA non-coding upstream 2058 26214899 ~ 26215110 (-)
G208048 NA non-coding upstream 2612 26215453 ~ 26215729 (-)
G208070 NA non-coding upstream 67606 26280447 ~ 26281036 (-)
G208307 NA non-coding upstream 149245 26362086 ~ 26362363 (-)
G208329 NA non-coding upstream 204880 26417721 ~ 26418448 (-)
LOC111195835 NA other downstream 94426 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 123643 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 125554 26079764 ~ 26086504 (-)
LOC111195825 NA other downstream 219564 25989438 ~ 25992494 (-)
LOC111195756 NA other downstream 274026 25919220 ~ 25938032 (-)
G208394 borcs5,LOC107753635 other upstream 442602 26655443 ~ 26656184 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 2003554 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 2449342 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 2570242 28783083 ~ 28860774 (-)
G209090 NA other upstream 3811120 30023961 ~ 30024550 (-)

Expression


Co-expression Network