trnai-uau_42


Basic Information

Item Value
gene id trnai-uau_42
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 6531576 ~ 6531668 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnai-uau_42
GCTCCTGTGGCACAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCAGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-uau_42 True 74 tRNA 0.57 2 6531576 6531668

Neighbor

gene id symbol gene type direction distance location
LOC111195822 NA coding downstream 74037 6444206 ~ 6457539 (-)
LOC111188205 LOC108424126 coding downstream 87126 6435530 ~ 6444450 (-)
LOC103037435 NA coding downstream 95603 6432385 ~ 6435973 (-)
mif mif,LOC107680670,LOC107594949,LOC107594906 coding downstream 121937 6407479 ~ 6409639 (-)
clp1 clp1,LOC107750374,LOC107680590,LOC107749782,LOC107594950 coding downstream 130271 6393195 ~ 6401305 (-)
LOC111195712 NA coding upstream 472380 7004048 ~ 7013680 (-)
LOC103028028 NA coding upstream 1698423 8230091 ~ 8246950 (-)
fnta fnta,LOC107678656,LOC107715177,LOC106604549 coding upstream 2024730 8556398 ~ 8566032 (-)
snx25 snx25,LOC107556844 coding upstream 2044302 8575970 ~ 8648702 (-)
enpp6 enpp6 coding upstream 2120742 8652410 ~ 8667241 (-)
G203762 NA non-coding downstream 44672 6421950 ~ 6486904 (-)
G203763 NA non-coding downstream 107311 6422781 ~ 6424265 (-)
G203761 NA non-coding downstream 110609 6417268 ~ 6420967 (-)
LOC111195709 NA non-coding downstream 242644 6269259 ~ 6288932 (-)
G203745 NA non-coding downstream 256284 6255462 ~ 6275292 (-)
G203818 NA non-coding upstream 49654 6581322 ~ 6581736 (-)
G203819 NA non-coding upstream 54783 6586451 ~ 6587438 (-)
LOC111195711 NA non-coding upstream 242160 6773828 ~ 6777113 (-)
LOC111195828 NA non-coding upstream 507931 7039599 ~ 7040273 (-)
G203919 NA non-coding upstream 862146 7393814 ~ 7394180 (-)
trnai-uau_41 NA other downstream 897 6530587 ~ 6530679 (-)
trnai-uau_40 NA other downstream 1445 6530039 ~ 6530131 (-)
selenoh selenoh other downstream 126288 6402156 ~ 6405288 (-)
LOC103032694 zdhhc5,zdhhc5b,LOC107594917,LOC107750372 other downstream 138810 6376735 ~ 6392766 (-)
G203734 NA other downstream 340461 6185773 ~ 6191115 (-)
trnai-uau_43 NA other upstream 769 6532437 ~ 6532529 (-)
jph3 jph3,LOC100148063,LOC107714052,LOC107654149,LOC107581833 other upstream 62710 6594378 ~ 6673928 (-)
map1lc3b NA other upstream 82936 6614604 ~ 6791991 (-)
LOC107197584 tenm2,LOC108268421,LOC108431098,LOC107752041,LOC107561160,LOC107670182 other upstream 925071 7456739 ~ 7743572 (-)
LOC103046444 LOC108431107 other upstream 3191734 9723402 ~ 9759067 (-)

Expression


Co-expression Network