LOC111197113 (LOC108414743,LOC108259908)


Basic Information

Item Value
gene id LOC111197113
gene name LOC108414743,LOC108259908
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171158.1
NCBI id APWO02000756.1
chromosome length 49787
location 41646 ~ 45519 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111197113
tttgaatatAAGATAATCAATAagtattattactgtaatatgAAATATGTAATAGTGTAAATTATAACACCACTATTTAACATGATCATCAGTTTCATATTAAATTCCTCCATATAGGAGATATATATGAAGATGAATCATTATCATATCCTGTAGCACATGATGATGAGAGTGTGTAGATGCTCCTATATGGTGAGTGTAGTTGAGTGACCCCTCCCTCTGCCCCCTCCTGTCTCTCTTATAGCTCATCCCTGCACTCTCTCCTTTATCTGCTCCTCAAGCTGCTCATCTCTTCACTCAGCACAGAGAGCATCACACACTGACAAGATGCTGCCAGCACTCTGCACTCTCTTCACTGCTCTCTCATGTGTCAGTGGTGTGACTGTGGTGACCCAGAATCCCCCTGTTCTCACACCGACTGAAGGAGAGACCACCACTATGTACTGTAATCTGGGAACAGTTACTAATTGGGCTGCTTGGTGGTATAAACAGGTTCCAGGAGGAGTTCCACAGTATGtgttaaggaattatcatggcTATAGTTCTCTTAGATATGGATCTGGCTTCTCTTCTCCTAAATTCACATCAACACACTCATCTAAATCAGATTACACTTTGATCATCAGTAATGTGGAGCTCATCCCTGCACTCTCTCCTTTATCTGCTCCTCAAGCTGCTCATCTCTTCACTCAGCACAGAGAGCATCACACACTGACAAGATGCTGCCAGCACTCTGCACTCTCTTCACTGCTCTCTCATGTGTCAGTGGTGTGACTGTGGTGACCCAGAATCCCCCTGTTCTCACAGCGACTAAAGGAGAGACCACCACTATGCACTGTAATCTGGGGACGGTTACTAATAGGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC108414743

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111197113 True 864 V_segment 0.44 4 41646 45519

Neighbor

gene id symbol gene type direction distance location
LOC107197409 NA coding upstream 863 37656 ~ 40783 (+)
LOC111197114 LOC108414743 coding upstream 5704 31646 ~ 35942 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026871 FP016018.3 non-coding NC_007114.7 CM002887.2 58654063 ~ 58673166 (-)
striped catfish (Pangasianodon hypophthalmus) LOC117596251 NA coding NC_047621.1 CM018567.1 17055583 ~ 17057882 (-)