G36372


Basic Information

Item Value
gene id G36372
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 14478818 ~ 14479322 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48946
cgcttttagactctttgtcctgtttttctgcgctagaaatgcgcactctctccgcttttagactctttgccctgtttttctgcgctagaaatgcgcactctctccgcctttagactctttgccctgtttttctgcgctagaaatgtgcactctctccgcttttagactctttgccctgtttttctgcgctagaaatgtgcactctctccgcttttagactctttggcccgtttttctgcgctagaaatgtgcactctctccgcttttagactctttggcctgtttttctgcgctagaaatgtgcaccctctccgcttttagactctttggcccgtttttctgcgctagacctgcacactctctccgcttttagactctttgccctgtttttctgcgctagaaatgcgcactctctccgcctttagactctttgccctgtttttctgcgctagaaatgcacaccctctccgcttttagactctttggcccgtttttctgcgctaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48946 True 505 lncRNA 0.48 1 14478818 14479322

Neighbor

gene id symbol gene type direction distance location
ccser2 NA coding upstream 848804 13525763 ~ 13630014 (+)
nudt13 nudt13 coding upstream 969926 13501047 ~ 13508892 (+)
arg1 arg1 coding upstream 1006854 13460651 ~ 13471964 (+)
heatr1 heatr1 coding upstream 1018847 13423037 ~ 13459971 (+)
LOC103038526 NA coding upstream 1119530 13352855 ~ 13359288 (+)
btbd16 NA coding downstream 143907 14623229 ~ 14645576 (+)
LOC103046321 plekha1 coding downstream 172328 14651650 ~ 14702499 (+)
LOC103041103 htra1,LOC107660481,LOC107745581 coding downstream 241557 14720879 ~ 14775197 (+)
LOC103041718 LOC108435036 coding downstream 319588 14798910 ~ 14822163 (+)
get4 get4 coding downstream 344331 14823653 ~ 14834347 (+)
G36370 NA non-coding upstream 16427 14462142 ~ 14462391 (+)
G36322 NA non-coding upstream 35662 14391304 ~ 14443156 (+)
LOC111192373 grid1,LOC105909129 non-coding upstream 504084 13863295 ~ 13974734 (+)
LOC111192374 NA non-coding upstream 508737 13965435 ~ 13970081 (+)
G36298 NA non-coding upstream 668580 13809742 ~ 13810238 (+)
G36382 LOC108435041,LOC107716480,LOC107660482,LOC107745560 non-coding downstream 101212 14580534 ~ 14589788 (+)
LOC111192375 NA non-coding downstream 137401 14616723 ~ 14618634 (+)
G36437 NA non-coding downstream 306728 14786050 ~ 14787301 (+)
G36442 LOC103041415 non-coding downstream 314149 14793471 ~ 14794336 (+)
G36499 NA non-coding downstream 558456 15037778 ~ 15037977 (+)
G36371 NA other upstream 15179 14463137 ~ 14463639 (+)
LOC103039668 LOC108435045 other upstream 958116 13502246 ~ 13520702 (+)
G35995 NA other upstream 1775762 12702305 ~ 12703056 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other upstream 1911877 12111690 ~ 12566941 (+)
G35967 NA other upstream 2107856 12366540 ~ 12370962 (+)
LOC107197918 NA other downstream 85603 14564925 ~ 14567912 (+)
G36439 LOC103041415 other downstream 310058 14789380 ~ 14790833 (+)
LOC103028998 pyyb,LOC103028998,LOC108410797,LOC107745683,LOC107569181,LOC107684781,LOC107695522,LOC107753323,LOC107560546 other downstream 953507 15432829 ~ 15440157 (+)
cabcoco1 NA other downstream 1734468 16213790 ~ 16233839 (+)
sun1 NA other downstream 2521060 17000382 ~ 17040957 (+)

Expression


Co-expression Network