Gene
RNA
| Item | Value |
|---|---|
| gene id | G55676 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 8439673 ~ 8439971 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU63330 | True | 299 | lncRNA | 0.42 | 1 | 8439673 | 8439971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_08425414_08428737 | NDUFA10 | coding | upstream | 10936 | 8425284 ~ 8428737 (+) |
| CI01000009_08412100_08415817 | NA | coding | upstream | 23757 | 8412100 ~ 8415916 (+) |
| CI01000009_08404846_08408838 | NA | coding | upstream | 30338 | 8403322 ~ 8409335 (+) |
| CI01000009_08376343_08388402 | ESYT3 | coding | upstream | 51144 | 8376312 ~ 8388529 (+) |
| CI01000009_08352876_08361244 | NA | coding | upstream | 77608 | 8352195 ~ 8362065 (+) |
| CI01000009_08538228_08542208 | NA | coding | downstream | 97324 | 8537295 ~ 8542225 (+) |
| CI01000009_08632210_08646938 | SH3BP4 | coding | downstream | 192085 | 8632056 ~ 8647074 (+) |
| CI01000009_08656562_08657212 | ARL4CB, ARL4C, ARL4C.S, ARL4CA | coding | downstream | 216591 | 8656562 ~ 8657835 (+) |
| CI01000009_08722799_08727763 | ACMSD | coding | downstream | 282626 | 8722597 ~ 8727763 (+) |
| CI01000009_08728451_08736059 | CCNT2A | coding | downstream | 288336 | 8728307 ~ 8736158 (+) |
| G55672 | NA | non-coding | upstream | 5025 | 8434423 ~ 8434648 (+) |
| G55657 | NA | non-coding | upstream | 7438 | 8431915 ~ 8432235 (+) |
| G55570 | NA | non-coding | upstream | 47530 | 8354372 ~ 8392143 (+) |
| G55594 | NA | non-coding | upstream | 76338 | 8307343 ~ 8363335 (+) |
| G55571 | NA | non-coding | upstream | 312385 | 8123430 ~ 8127288 (+) |
| G55677 | NA | non-coding | downstream | 642 | 8440613 ~ 8440820 (+) |
| G55679 | NA | non-coding | downstream | 21480 | 8461451 ~ 8465708 (+) |
| G55697 | NA | non-coding | downstream | 33171 | 8473142 ~ 8473401 (+) |
| G55706 | NA | non-coding | downstream | 46985 | 8486956 ~ 8487179 (+) |
| G55712 | NA | non-coding | downstream | 65818 | 8505789 ~ 8508691 (+) |
| G53651 | NA | other | upstream | 2191281 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 2506872 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 2900619 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 5230689 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 5377086 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 689329 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 1413388 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 3320815 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 3493971 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 3992587 | 12432538 ~ 12436017 (+) |
