G17791


Basic Information

Item Value
gene id G17791
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 10259935 ~ 10260287 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU23999
GCAGATTCAATAAGGCCTCGAAGTGACTTagatatatattgtcatttttgtcgtgtgtagctagatgactctacagcgccccctatttggttCGGCTAATAAATTAGCCGTGGCCTTCTCAAAAATTCTCAGATATTCTCGATTTTTGACAGAAACATAGACAATATGATTCTGCACATATTAGCAATCGGAATgcattagctccgcccaacaggaagtcggccattttggaatttgtggaatttttacatatttttcacaaactcattcgaactcctcctagagtctttgtcagattacctctaaattgTCAGTGGATAGTCCCCAGACATACATGGtgctaaattgcgaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23999 True 353 lncRNA 0.45 1 10259935 10260287

Neighbor

gene id symbol gene type direction distance location
mppe1 mppe1 coding downstream 2062 10231513 ~ 10257873 (-)
elovl2 elovl2,LOC101268971 coding downstream 141327 10103179 ~ 10118608 (-)
gcm2 gcm2,LOC107552658,LOC107664656,LOC107707735,LOC107654664 coding downstream 181353 10071078 ~ 10078582 (-)
bloc1s5 bloc1s5 coding downstream 1146030 9109014 ~ 9113905 (-)
txndc5 txndc5,LOC107730007 coding downstream 1175649 9071382 ~ 9084286 (-)
LOC103028097 tnip3 coding upstream 7371 10267658 ~ 10278333 (-)
LOC103029242 LOC103029242,LOC108414971,LOC108256685 coding upstream 68803 10329090 ~ 10340189 (-)
LOC103044364 LOC108412379 coding upstream 624566 10884853 ~ 10952099 (-)
aspa aspa,LOC107665049,LOC107712162,LOC107595485,LOC107731059 coding upstream 1087368 11347655 ~ 11370382 (-)
LOC103046022 NA coding upstream 1120715 11381002 ~ 11387605 (-)
G17782 NA non-coding downstream 126197 10133289 ~ 10133738 (-)
G17780 NA non-coding downstream 162210 10093193 ~ 10097725 (-)
G17770 NA non-coding downstream 228954 10017813 ~ 10030981 (-)
G17757 NA non-coding downstream 305822 9952363 ~ 9954113 (-)
G17690 NA non-coding downstream 326800 9932915 ~ 9933135 (-)
G17796 NA non-coding upstream 9204 10269491 ~ 10270624 (-)
G17799 NA non-coding upstream 33299 10293586 ~ 10298657 (-)
G17808 NA non-coding upstream 82509 10342796 ~ 10343263 (-)
G17845 NA non-coding upstream 280191 10540478 ~ 10543607 (-)
G17859 NA non-coding upstream 594339 10854626 ~ 10855071 (-)
G17792 NA other downstream 12617 10246675 ~ 10247318 (-)
mak mak other downstream 250784 9995145 ~ 10009151 (-)
G17638 NA other downstream 697210 9562427 ~ 9562725 (-)
LOC111188216 NA other downstream 1373618 8861134 ~ 8886317 (-)
LOC103026934 ahrr,LOC108431062 other downstream 2252315 7924929 ~ 8007620 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other upstream 755742 11016029 ~ 11080184 (-)
LOC107197924 NA other upstream 815951 11076238 ~ 11083799 (-)
abr abr,si:ch211-253h3.1,LOC107665039,LOC107712163,LOC107688618,LOC107731041,LOC103375456,LOC106567975 other upstream 825193 11085480 ~ 11334518 (-)
LOC103044489 LOC103044489,LOC108428292 other upstream 1175149 11435436 ~ 11595523 (-)
G18037 NA other upstream 1424700 11684987 ~ 11685391 (-)

Expression


Co-expression Network