nuak1 (nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835)


Basic Information

Item Value
gene id nuak1
gene name nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 6096340 ~ 6119766 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229722.3
GAAGCCCGCCTTCAGCCTGCATTCCTCGCATTCACATTGGAGAGTGGTGAGGGTGGGAGGGGAGTGGAGGGGGCTGGAGGCCGGTCGGCAGTGTTAATCTGCTCAGCCTGCCACTGTTTCTCTCCACATGTGAGCAGCTGCCACTGCCTGCCTCACGTCCCGAAACACACAGAGCAGTGTGAGTCCGCTCTCTACTGGAGCAGGATTCACCGCTTCACTTCAACTCTTCACCAGCACAGAGGAGACCCTCCACAGCCTCCGGTTAACCCACAGAGAGTCTGGAGCAGCTCTGAGACTGACTGTGTTCAGGAGGAGCAGAGCGGGGCTGGACTGAGGAGGAGATATTCAGACTCCGGAGCGGACAGCGCTTCTCCACACTTCAGTCAGAGAGTTTAAACTGTGCTGAAGAGTGAATATCTCTCCAGATAACCGCACACTCACAcctccttctccctctcttcaCCCCCATGAGCGCCCCGGGTCTGCGCTGATCTCAGGGCGGTGGGGCAGTTAGTCCGTTAGCTGAGGCGGGTCAGTGGAGGAGGGATGGAGCCGGGCTGTGGAGAGCAGCAGCCCGCCGCGGCAGACACGCCGCTGCCCGTGGACTTCCCCCCGGGAGAAGTGCCGCCGTCTCTCGCGGTGAGGAGAGGCTCCAGTGTGAAGAAACACCACCACAAACACAACCTGAAACACCGCTACGAGCTGCTGGAGACGCTGGGCAGAGGCACCTACGGGAAAGTGAAGAAAGCGGTGGAGAAACACACCGGCCGAGTGgTGGCAATTAAGTCCATACGTAAAGAGAAGATCAAAGAGGAACAAGACATGGTTCACATACGCAGAGAGATCGAGATCATGTCATCCCTTCGGCACCCGCACATTATCTCGATATATGAAGTGTTCGAGAACAAGGACAAGATTGTGATTGTGATGGAGTACGCCAGCAAAGGGGAGCTGTACGACTACATCAGCGAGCGGCGGAAGCTCAGCGAGAGGGAGACGAGGCACTTCTTCAGACAGATCGTCTCAGCCGTGCACCACTGTCACAAGaatggAGTGGTGCACAGGGACCTAAAACTGGAAAATGTGTTACTAGATGACAACTGTAATATAAAGATAGCAGATTTTGGCTTGTCCAACCTCTACCAAAAAGACAAGCTCCTGCAGACCTTCTGCGGCAGCCCTCTCTACGCTTCACCTGAAATTGTAAATGGGAGGCCATATCGAGGACCAGAAGTTGACAGCTGGGCTCTTGGGGTGTTGCTCTACACTCTGGTGTATGGCACAATGCCTTTTGATGGAGGGGATCACAAAAGACTCATACGACAAATCAGCAACGGGGAGTACCGGGAACCACCGCAGTCATCAGaTGCTCGTGGCCTGATCCGCTGGATGCTGATGGTAAACCCAGACCGTCGCGCCACCGTGGAGGACATAGCCAACCACTGGTGGGTGAACTGGGGCTGGAAAACCAGTGTGTGTGACTGCCAAACTCAGCGAGAGAACAGCTCGCCCATGCTGGCTCGCTTTATTGACTGGCAGAACCGCACAGACACCCAACCCGGCAAGGCAGCTCTCGCTGATACCGCTGCCAACAGCAGTGGACTCGCTTCAGCCCGGCGCCTCCGGAGATCCTCGAAGGAGAATGATGGAGGCACAAGAGCTGTAACGGAAGAGAAGCCAGGACTTAAGAGGCCCAAAGGCATACTAAAGACACGGGCCAGCAGTGGAGATCAGCGCTCACAGAGCCTGTGTGAAGTGGAGCTGCGCCGCTCCATCTGCTACCAGGATGTGGAGGCTACTTCCAGTCCGGAGAGGGAGGACACTCTGGGTGGCTCCCCAGCCAAAATAATGCCCTCCCTGCCTAAAAAAGGCATTCTAAAGAACAACCAGCAGCGCGAGTCTGGCTATTACTCATCTCCTGAGCGCAGCGAGTCCTCCGAACTGCTAGGGGACAGCATAGTGCTCCCTCCAAATGGCTCGCCACCTAAGAGAGCTGCTAGGAAGGGCATACTGAAGAGGAACGGGAAGTACTCTGCTCACAGTAACCTCTCTAGCTCTGCGGTTCATGGGGAAGGTCACGTACAGGACTCCGGAATTTCTCGGAGCCAGAGCAGACCCTCCAGCATTGTGGGTGAGGAGATTGGGCTCTCTATTGGCATAGACTGGCCACACACTTCACCCAATCCCAACATCAGGAGCTGCCTGTCGGCCGAGGACCTGCTGCAGATGGCCGGCTTCAGGGGCCTCCAGACGGCTGCCCCTCTTCACGGCACAAAAGTAAACCGCAGCCCCCCAGGATCTCCAGGAGACAATGGAAGCTTCTCGCTGCTCGGGGACCTGGACGATGTGACTCAAGTGTACCAGCAAGCCCTGAACATCAGCAACCAGCTGAGTTAGTGGAGGAAAGAGTGCTTTAGGGAGCATTTTAGGGAGCATAGGCTGCCTGTTCTCCCCTCTGTTCAATGACCCGCAAGTGATCAAACATCAAGAGAACTTATGTGAAAGGCCAATGGGAAGTGTCTGAAGCATTCAGGACTGATTGATGGACAGACCATCAATCCAATCACTGACATTGTTCTGCATTGTAATGTTTACATAGTGAGAGAAGGGAAAACTGAGGTTACAGATCTAAACTTACTTACTCAGTGTCCATGAGGAATGAAACATGCACCTTGCTGACATGGTGTCCTCCCCAGCACAATACTGGATATGATTGTCAGtaaatatatggatatatggCACAGAATATTTCCGTAGACTAATACAGGTTTTTGTTTCTTATATGTTCACAGCATTTAGCCCTCAGACATCCTTAGTAAAGTAGAGCTTAGCCACATTTTGGACTACATCACATGGTAACTGCAGTATGTGTGGAGAAACAAGGTGATGAAACCATCTTCATCTCTAGAACCTAATTATAGTACATTgtatataaaatcaaattaaaaagagGCGAGGAAGACAAAAGGACAAGACAAGTTTTAAGACCCAGGATGACTTTCTTACAAAAGATGTCCAAACTATGCCTCCCAACGCAATGTAAAATCTCCTcataaactaaactgaacataAACTAAGCTTCTCCTTTCTAATCTGGTCTATGACTTTCGTCTTTTAGATTAGTAGGAAACTGGCAGAAGTGGTCACATAGTCCGAAAATGCTCAAACACAAACCTCCGTCAGGTCCGTTTTAGACTACCAGCATCATCTGGGTTTACTTCTGCTTAACAGGAGGCACCTGTAGGGGTCAAAGGTTGTGTCAGTGTTATAGCAAGTGTTTAGAACTTTATGGCACAAACACTGCTGCTTTTATAACGCACCTTCTAAGCATGCTCGTTGTGGTGGGTGGGCAGGGTGTAACCCGTGGAGAAAAAGCAGTGCAGGAACACCCTGTCTTTCAACAACAGTGGCCATTGAAATGGGAGGAATAGGCTAAACCATTCTTGCTGAATATCAGCACTGTGACATGGTGCCTATTTTAAAGGTGACAGGTTATGAAAAGAAGGttttaaagggcccatatcctttgaatttgttttttttttctccatgaaGTCCACTTATGATATTTGCAAGAGTTTAGATTCCAAAACTGCAATGCATTTCTAATTGAAATGAATATTTTGACTAAAACTCTTTTAGTTGAATTTGCAGAGCTGAAATGCTTTAAGTTAAATaggtcaatatatatataaatataaatacatttgaattcCATTTTTTTGAAGACTGGACTGGAAAGATAATGTAATTTGTACACTAGATGTTTGTgtactaaataaaatgttgtttaaaatattagaattaTTCACTTTTCCCAAATATGGGCCCTTAAGAAATGCAAAACGAGGGTTGGACAAAACGATAGGACAATATCCTGTGCTCTGATCATCGTGCTTGTGctgtttatatatttctgtttatcAGACAATGAAATACTATCTTTAACTGGATCCACAGTGGCAAATGTTATACTATGTTAGTatctttgttgttgttatttttggatacattttacttttaagttTAATATCCACATGGGTGAGAGTGCTTTGGCTTAAttacagaggcagagctttaaCAAAATCAAAGCCAAACATTCAAAAGAGAAATGTAGTGTGCTTTATATACGACAGGCTGCAGGACGAAGCACATGGCAGGGAATGATCTggctaaatataatttataaaaataaataaataaaaagattagTCCGTGCTTCTGTATCTGCTTAACTGGAAATGAATGTTAAAGCATTATTTATCATCTAGGATAAGTTCCATGTTGCAGTAATTAACTGGATATtctctgtgtgtatttatatgtatttaaatgtactgTTATTTAATCTTTCttgtattatattactgtacATTATTGCTTTGACCATTTATATTATTGCTTTTtctgttatgtttttttgcatACACAAGATGTTAACCTTGAGCCTTTAAATGTCTTGTTTATTTGCCTTCTTTGACAAACGATTGTCCGtatgattaaatattaaacttcAGTTTATGGTGTTAAATAATTAGTGAATAAGTTACTTAATTAGGTACAAGTAATAGATATGACAAAACAGATTCTCtgtgttattttgtgttaaaaGTAAATGGATGTAAAtggattttaaatgtatttaggcATCTATGATGTCCATACTCGACCCAAAACACCATGGCCTCTAATAAAAGTCTGTGGTCTACCAGAA

Function

symbol description
nuak1a Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in cellular response to glucose starvation; intracellular signal transduction; and protein phosphorylation. Predicted to be active in cytoplasm. Is expressed in ventral mesoderm. Orthologous to human NUAK1 (NUAK family kinase 1).
nuak1 Enables p53 binding activity and protein serine/threonine kinase activity. Involved in several processes, including protein phosphorylation; regulation of cellular senescence; and regulation of myosin-light-chain-phosphatase activity. Located in cytoplasm; microtubule cytoskeleton; and nuclear lumen.

NR:

description
PREDICTED: NUAK family SNF1-like kinase 1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08800 NUAK; NUAK family, SNF1-like kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229722.3 True 4714 mRNA 0.46 7 6096340 6119766

Neighbor

gene id symbol gene type direction distance location
abcc9 abcc9,LOC108439416 coding downstream 370057 5664901 ~ 5726283 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding downstream 433059 5658448 ~ 5663281 (-)
cmas NA coding downstream 443317 5644509 ~ 5653023 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding downstream 601689 5456709 ~ 5494651 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding downstream 759941 5314557 ~ 5336399 (-)
LOC103029290 prl2,LOC108439418,LOC107655571,LOC107725674,LOC107587154,LOC107582933 coding upstream 20196 6139962 ~ 6144208 (-)
LOC111192868 NA coding upstream 602336 6722102 ~ 6723530 (-)
LOC111192905 NA coding upstream 615391 6735157 ~ 6736574 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding upstream 731402 6851168 ~ 6855742 (-)
LOC103043330 NA coding upstream 811397 6931163 ~ 6955225 (-)
G62272 NA non-coding downstream 80637 6014004 ~ 6015703 (-)
G62237 NA non-coding downstream 128623 5928492 ~ 5967717 (-)
G62244 plxnb2a,LOC108439415,LOC108279839,LOC107587155,LOC107725571 non-coding downstream 146335 5948198 ~ 5950005 (-)
G62217 NA non-coding downstream 334507 5759463 ~ 5761833 (-)
G62210 NA non-coding downstream 364153 5731028 ~ 5732187 (-)
G62307 NA non-coding upstream 38491 6158257 ~ 6159938 (-)
G62354 NA non-coding upstream 215757 6335523 ~ 6335771 (-)
G62361 NA non-coding upstream 235037 6354803 ~ 6355105 (-)
G62363 NA non-coding upstream 238895 6358661 ~ 6363880 (-)
G62375 NA non-coding upstream 253929 6373695 ~ 6374194 (-)
G61942 NA other downstream 1473763 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 1670184 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 2249871 3840601 ~ 3846469 (-)
G61676 NA other downstream 2438072 3650845 ~ 3658268 (-)
mdm1 NA other downstream 2547638 3529520 ~ 3548702 (-)
G62377 NA other upstream 254703 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 513244 6633010 ~ 6695389 (-)
G62484 NA other upstream 551844 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 608108 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 667576 6787342 ~ 6859670 (-)

Expression


Co-expression Network