G127375


Basic Information

Item Value
gene id G127375
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 35982698 ~ 35983876 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU172027
cttagctcagCTAGCTAGCCTACTGGTAACAGAAGTTAAATGTTAGCTGTTTTTTAGCTCTGTTTTGCtgttaataaaacagaaatttgTTGAATAATTTAGTGCTAAAGGTTTAGAGGAATATCAGAAGAAGAAAATATAAGTTTAAGCCACATAGAAATGTTATAAACACtatatctgtctatctacctaACTTATATAGATAGCCTAACTTACTGGTTACAAAACTTAGGAGGTAAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172027 True 243 lncRNA 0.31 2 35982698 35983876

Neighbor

gene id symbol gene type direction distance location
LOC103043535 NA coding upstream 2612 35976784 ~ 35980086 (+)
LOC103043841 LOC103043841 coding upstream 7153 35970109 ~ 35975545 (+)
LOC103026124 LOC108436592,LOC106955578,LOC104953222 coding upstream 117271 35851414 ~ 35865427 (+)
nudt2 nudt2,LOC107661859,LOC107739745,LOC107579639 coding upstream 170991 35809505 ~ 35811707 (+)
ell2 ell2 coding upstream 235692 35717435 ~ 35747006 (+)
zer1 zer1,LOC107717741,LOC106570444 coding downstream 222418 36206294 ~ 36223911 (+)
LOC103041373 NA coding downstream 334256 36318132 ~ 36322205 (+)
LOC103041064 stk10,LOC100703168,LOC101487196,LOC102210605 coding downstream 339858 36323734 ~ 36392902 (+)
gfi1b gfi1b,LOC108444114,LOC106563235,LOC108271917 coding downstream 479297 36463173 ~ 36472246 (+)
gpn3 gpn3,LOC102778879 coding downstream 646149 36630025 ~ 36634321 (+)
G127362 NA non-coding upstream 34653 35947390 ~ 35948045 (+)
G127291 NA non-coding upstream 231320 35750262 ~ 35751378 (+)
G127279 NA non-coding upstream 279591 35650119 ~ 35703107 (+)
G127264 NA non-coding upstream 346126 35555911 ~ 35636572 (+)
G127386 NA non-coding downstream 84051 36067927 ~ 36094480 (+)
G127379 NA non-coding downstream 84459 36068335 ~ 36069013 (+)
G127378 NA non-coding downstream 85543 36069419 ~ 36072536 (+)
G127398 NA non-coding downstream 197182 36181058 ~ 36183606 (+)
G127413 NA non-coding downstream 375355 36359231 ~ 36396563 (+)
dtwd2 dtwd2 other upstream 13245 35966334 ~ 35969453 (+)
G127365 NA other upstream 24397 35954858 ~ 35958301 (+)
G127359 NA other upstream 39576 35934919 ~ 35943122 (+)
ubap1 ubap1 other upstream 144644 35828635 ~ 35838054 (+)
glrx glrx,LOC105014469,LOC107661879 other upstream 221586 35755344 ~ 35761112 (+)
G127393 NA other downstream 191917 36175793 ~ 36177113 (+)
G127414 sh3pxd2b,LOC108413712 other downstream 413017 36396893 ~ 36401487 (+)
LOC103040450 atp2a2b,LOC108444117,LOC108278817,LOC103365013 other downstream 669421 36653297 ~ 36709049 (+)
G127456 NA other downstream 884762 36868638 ~ 36880665 (+)
sema4d sema4d,LOC107568542 other downstream 1180824 37164700 ~ 37214615 (+)

Expression


Co-expression Network