G127393


Basic Information

Item Value
gene id G127393
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 36175793 ~ 36177113 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU172052
AAATCAATCTGCAAAAACGCTACATCAGTTCTCTCCTACATCCAGCGAGATTAGAATATTTACAATAAGTTACAATTCAAAAGTTAGGTTGCAGCGATCTTAATGATCTTAATGATCTTTAAAAACAGAGTACAGGAGGGAGATCAGTGATATTAGACATGTTATGCATATCGAACAGATCTGGCGCTAGTTTTAGAAAAGAAAAGTGGACGAACAGAACCCATTATCATTATGATTGGGAGagtgctggttcgaatccctgtcatgcagcttgtcatcagctaccagagccctgagagagcacaattggtcttgctctctctgggtgggtacagtagatggcgctctctctttcccctcatcattcctagggtgatgtggatcagcacaaggctgcatctgtgagctgatgtatcagaacagcgttagcgctgtgatgctactcggaaatgctgcataaatgcttcaccctcctggtgttgtggcatcactagacACTCCCACTCTGCAAATAAGTGGTTGCAGGAACCAATGAGCTCAAATCAAATTAGTTTAACTCATTTAAAATTTTCACCTCATTAAACGAACATAAAAACCTTACGTTAAAAGGCTGACATCTTATAAACTCATAAAATGTGATAATTTAAGATACATTGAACAAATTGGAAGCTAAAGGATGCCGCACTGACATGGGATGAATTTGTGTGTGAGGTCTCCTGCATTGTGTGTGCTCACTTGGACaaatctagccagatgctgccggtcacaatcattaccactccCTGCATTGCAATTTTTAAGTCCTGAATTACTTTCTCACGACATGTTGCATGTCATAGAAGTCACCGTTCTTACTGTACAGTCAAcagtctctccctccctccctccctctctctctctctctctctctctcttttttccagggTGCACCTTCCTTTACTTAAGGCCTCCATTtcttcacattctctctctctttcagaaaTCTGGCAGTAGACGAGTTTCCACAGCAGCTGTTCTGCAGTTACACGCTGTACAGCTTCAGTTTCATGCTGAGATTCTTCAGCCTGACCATTTAAAAACCCCGATCCTACAactgcagctctgaaaaaaaaataagaaagctcttaaaaataatgagtttctttgattttaccaaattaaaaacctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaatcagcataaagttatccaaaagcagtgtgtaagactggtggaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172052 True 1299 TUCP 0.41 2 36175793 36177113

Neighbor

gene id symbol gene type direction distance location
jak2 jak2 coding upstream 134827 35981868 ~ 36040966 (+)
LOC103043535 NA coding upstream 195707 35976784 ~ 35980086 (+)
LOC103043841 LOC103043841 coding upstream 200248 35970109 ~ 35975545 (+)
LOC103026124 LOC108436592,LOC106955578,LOC104953222 coding upstream 310366 35851414 ~ 35865427 (+)
nudt2 nudt2,LOC107661859,LOC107739745,LOC107579639 coding upstream 364086 35809505 ~ 35811707 (+)
zer1 zer1,LOC107717741,LOC106570444 coding downstream 29181 36206294 ~ 36223911 (+)
LOC103041373 NA coding downstream 141019 36318132 ~ 36322205 (+)
LOC103041064 stk10,LOC100703168,LOC101487196,LOC102210605 coding downstream 146621 36323734 ~ 36392902 (+)
gfi1b gfi1b,LOC108444114,LOC106563235,LOC108271917 coding downstream 286060 36463173 ~ 36472246 (+)
gpn3 gpn3,LOC102778879 coding downstream 452912 36630025 ~ 36634321 (+)
G127386 NA non-coding upstream 81313 36067927 ~ 36094480 (+)
G127378 NA non-coding upstream 103257 36069419 ~ 36072536 (+)
G127379 NA non-coding upstream 106780 36068335 ~ 36069013 (+)
G127375 NA non-coding upstream 191917 35982698 ~ 35983876 (+)
G127362 NA non-coding upstream 227748 35947390 ~ 35948045 (+)
G127398 NA non-coding downstream 3945 36181058 ~ 36183606 (+)
G127413 NA non-coding downstream 182118 36359231 ~ 36396563 (+)
G127412 NA non-coding downstream 201738 36378851 ~ 36394024 (+)
G127439 NA non-coding downstream 338839 36515952 ~ 36552438 (+)
G127442 NA non-coding downstream 445040 36622153 ~ 36634817 (+)
dtwd2 dtwd2 other upstream 206340 35966334 ~ 35969453 (+)
G127365 NA other upstream 217492 35954858 ~ 35958301 (+)
G127359 NA other upstream 232671 35934919 ~ 35943122 (+)
ubap1 ubap1 other upstream 337739 35828635 ~ 35838054 (+)
glrx glrx,LOC105014469,LOC107661879 other upstream 414681 35755344 ~ 35761112 (+)
G127414 sh3pxd2b,LOC108413712 other downstream 219780 36396893 ~ 36401487 (+)
LOC103040450 atp2a2b,LOC108444117,LOC108278817,LOC103365013 other downstream 476184 36653297 ~ 36709049 (+)
G127456 NA other downstream 691525 36868638 ~ 36880665 (+)
sema4d sema4d,LOC107568542 other downstream 987587 37164700 ~ 37214615 (+)
homer1 homer1 other downstream 1050252 37227365 ~ 37277757 (+)

Expression


Co-expression Network