LOC103041373


Basic Information

Item Value
gene id LOC103041373
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 36318132 ~ 36322205 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252796.3
AATGCAATAAGCTCGACCCACGCTCCTCCCAAGTCAATTTTGTGGCCAATTCTGGCGACGCCTCCTTCTGTGGATGACCAGACATTCCAAGCAGCTCATCTTCTCAGATTGAtttatgtgtgtattgtgttttgGAATAAACACAGGCTCGTCTGAATCAGCTCTTTGCTCAGCGAATAAAAAGCGAATcccacagcagtgctgtttaaACACGTCCTCATCATGCTGGGATCCACTCTGCTCGGGCTGATGGTGGTTACCCTGGTTTGGGGTCAGCAGTACCCCATCCCACCAACCTGCTACAGCAAAGTGCTGACCATGGCCGTGGATATCAATGCGAGAGCAGCGCAGATCAAGAACGTCTACGACACTatgggaTGTTCTACACACCTGCCTGACCTGTATATTGATGTGCACAATGCGTGTGTGATTTCCACCATGAGCTCATATCTGTCCAACCTGCGCAGCATCAGGGAGGGACGCTGCGGATACTCCAGACCAGTGCAGCTACTGATGACCAGCATCAATCAGCTGAACCACATCATTGCACAGAAATGCCACGGGgaaCTGGCCTTCACCTATGATGACTGTGCTGTACTGCGAGGTAGAAGATACTAAGAAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252796.3 True 625 mRNA 0.50 4 36318132 36322205

Neighbor

gene id symbol gene type direction distance location
zer1 zer1,LOC107717741,LOC106570444 coding upstream 94221 36206294 ~ 36223911 (+)
jak2 jak2 coding upstream 277166 35981868 ~ 36040966 (+)
LOC103043535 NA coding upstream 338046 35976784 ~ 35980086 (+)
LOC103043841 LOC103043841 coding upstream 342587 35970109 ~ 35975545 (+)
LOC103026124 LOC108436592,LOC106955578,LOC104953222 coding upstream 452705 35851414 ~ 35865427 (+)
LOC103041064 stk10,LOC100703168,LOC101487196,LOC102210605 coding downstream 1529 36323734 ~ 36392902 (+)
gfi1b gfi1b,LOC108444114,LOC106563235,LOC108271917 coding downstream 140968 36463173 ~ 36472246 (+)
gpn3 gpn3,LOC102778879 coding downstream 307820 36630025 ~ 36634321 (+)
arpc3 arpc3,LOC107707141,LOC107737855 coding downstream 312965 36635170 ~ 36639757 (+)
LOC111193953 NA coding downstream 391334 36713539 ~ 36719908 (+)
G127398 NA non-coding upstream 134526 36181058 ~ 36183606 (+)
G127386 NA non-coding upstream 223652 36067927 ~ 36094480 (+)
G127378 NA non-coding upstream 245596 36069419 ~ 36072536 (+)
G127379 NA non-coding upstream 249119 36068335 ~ 36069013 (+)
G127375 NA non-coding upstream 334256 35982698 ~ 35983876 (+)
G127413 NA non-coding downstream 37026 36359231 ~ 36396563 (+)
G127412 NA non-coding downstream 56646 36378851 ~ 36394024 (+)
G127439 NA non-coding downstream 193747 36515952 ~ 36552438 (+)
G127442 NA non-coding downstream 299948 36622153 ~ 36634817 (+)
G127447 NA non-coding downstream 318939 36641144 ~ 36642244 (+)
G127393 NA other upstream 141019 36175793 ~ 36177113 (+)
dtwd2 dtwd2 other upstream 348679 35966334 ~ 35969453 (+)
G127365 NA other upstream 359831 35954858 ~ 35958301 (+)
G127359 NA other upstream 375010 35934919 ~ 35943122 (+)
ubap1 ubap1 other upstream 480078 35828635 ~ 35838054 (+)
G127414 sh3pxd2b,LOC108413712 other downstream 74688 36396893 ~ 36401487 (+)
LOC103040450 atp2a2b,LOC108444117,LOC108278817,LOC103365013 other downstream 331092 36653297 ~ 36709049 (+)
G127456 NA other downstream 546433 36868638 ~ 36880665 (+)
sema4d sema4d,LOC107568542 other downstream 842495 37164700 ~ 37214615 (+)
homer1 homer1 other downstream 905160 37227365 ~ 37277757 (+)

Expression


Co-expression Network