LOC103043535


Basic Information

Item Value
gene id LOC103043535
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 35976784 ~ 35980086 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015606746.2
ACAGTAGCTACACACGTAAAGTCTGTAGGAAAAGGTTATTTTACACTTAtctgtgtgtttagtgagggaaATCTCAGTAAAAACAGCTGTATCTCAGTAAAAACAGCTGTATCTTTATCTGAATCTGTGTTTTTGGTTAACATGGGGACTCTTCCTGATTTAACTGAGCTGAGAACAAAGCTGGAGAGCACAATCCTGTCTTACCACAGTCTGGAAGAGAAGGACTGGACCCTAGCAAAGAAACTGGATACTGTCACAGCTTGGAAGAGACCTTCAACAGAGTTTAACGGCTACCTGGTCAAAGTTCAGGGGGTTATTATGGACACGCCACAGAGGATCATAGATCATATCCGACCAGGGCCATGCAGGAAAGAATGGGATAAAATGATGACTTCACTGGAAATTGTTGAGACAGTGGACAAggacagtgtgtgtgtggtgcgaTACACAACTGCAGGACTCCTGCTGAACATGATCTCTCCCAGGGAGTTTGTGGATTTCGGTTTTGTCAGGGAATATGAGAACGGCCTTCTTTTTTGTGGTAAGAGTATACCCTATGAGCCGAGTACTTCAGGTTGTGTTCGGGGCTTTAATCACCCCTGTGCCTGGCTCTGTGTTCCTGTGGATGAATCCCAGAGTCTCCTCATCGGTTACCTTCAGACTGACCTCGGGGGACTCGTTCCTCAGTTCGCTGTGGAGAGCGCCATGGCCAACACGATGGGCTCCTTCTACACTGAGCTCGGCAAAGTGCTAAAAAAATGAAGTACACAACTTAGAGCAGTAAGGGTCAGGATTAAGATAGCACctgagtaggggtgggcaattttatatcgtatacaatatatcgtgacacagaaatatcatgatattaaaagtccatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015606746.2 True 882 mRNA 0.45 5 35976784 35980086

Neighbor

gene id symbol gene type direction distance location
LOC103043841 LOC103043841 coding upstream 1239 35970109 ~ 35975545 (+)
LOC103026124 LOC108436592,LOC106955578,LOC104953222 coding upstream 111357 35851414 ~ 35865427 (+)
nudt2 nudt2,LOC107661859,LOC107739745,LOC107579639 coding upstream 165077 35809505 ~ 35811707 (+)
ell2 ell2 coding upstream 229778 35717435 ~ 35747006 (+)
LOC103028363 LOC108437782 coding upstream 265607 35706224 ~ 35711177 (+)
jak2 jak2 coding downstream 1782 35981868 ~ 36040966 (+)
zer1 zer1,LOC107717741,LOC106570444 coding downstream 226208 36206294 ~ 36223911 (+)
LOC103041373 NA coding downstream 338046 36318132 ~ 36322205 (+)
LOC103041064 stk10,LOC100703168,LOC101487196,LOC102210605 coding downstream 343648 36323734 ~ 36392902 (+)
gfi1b gfi1b,LOC108444114,LOC106563235,LOC108271917 coding downstream 483087 36463173 ~ 36472246 (+)
G127362 NA non-coding upstream 28739 35947390 ~ 35948045 (+)
G127291 NA non-coding upstream 225406 35750262 ~ 35751378 (+)
G127279 NA non-coding upstream 273677 35650119 ~ 35703107 (+)
G127274 NA non-coding upstream 372141 35596326 ~ 35604643 (+)
G127268 NA non-coding upstream 394792 35578546 ~ 35581992 (+)
G127375 NA non-coding downstream 2612 35982698 ~ 35983876 (+)
G127386 NA non-coding downstream 87841 36067927 ~ 36094480 (+)
G127379 NA non-coding downstream 88249 36068335 ~ 36069013 (+)
G127378 NA non-coding downstream 89333 36069419 ~ 36072536 (+)
G127398 NA non-coding downstream 200972 36181058 ~ 36183606 (+)
dtwd2 dtwd2 other upstream 7331 35966334 ~ 35969453 (+)
G127365 NA other upstream 18483 35954858 ~ 35958301 (+)
G127359 NA other upstream 33662 35934919 ~ 35943122 (+)
ubap1 ubap1 other upstream 138730 35828635 ~ 35838054 (+)
glrx glrx,LOC105014469,LOC107661879 other upstream 215672 35755344 ~ 35761112 (+)
G127393 NA other downstream 195707 36175793 ~ 36177113 (+)
G127414 sh3pxd2b,LOC108413712 other downstream 416807 36396893 ~ 36401487 (+)
LOC103040450 atp2a2b,LOC108444117,LOC108278817,LOC103365013 other downstream 673211 36653297 ~ 36709049 (+)
G127456 NA other downstream 888552 36868638 ~ 36880665 (+)
sema4d sema4d,LOC107568542 other downstream 1184614 37164700 ~ 37214615 (+)

Expression


Co-expression Network