G62838


Basic Information

Item Value
gene id G62838
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3890095 ~ 3893793 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71560
CTCCATTCATATGCATCGGGTCCATTCCTGCCATGGCCCCTAGGGGTCCCTCAGAGCCTGGGCCTATGGGAAAGCTGTTGCGCCCTCCACCTCCTGAGTTTATCATGGTGTACAGGTTTTCACTGGAATTGTTGGAGTCTGCTGGACTAGGAACAATTCCAGGTGTTCCCGGAGGCCCCCCTCCTTGTGGACCCCCGTATGCACCAGGAGATGGTGATGAATATGGCATATTGTTGGCATTTGGATTTGGCCATGGTGGTCTGCCATTTCCAGGGCCCATATTCACTCCTGGCATGCCAGGGCCCATTGAGTTGTGTGGTGGTCTCATCCCTCCTCCAAAACTCTGAGGGCCGGGGCCCATGGGTCCCATTCCTCTAGGAACATTCATCCTCTGCATCGGCCCTTTAGATAGGGAAAGGAGAAGTCAAATAAGTTAATGCTGTCTTGCCGCTTTAAAATACCTCAGATGTCATAAGCGATGAAGGCTCACCCTGTAGTCTGGGATCCATGTTTGGGAGCATTGGCTGGGCAGTTGGAACTCCACCGGGGGGCTGGAAATTTTAGATACAAATTTAATTAACATTCATTTAATTTGACATTTTCATTTAAGCTACAATAACTGACACCAATTTCATGTTGATGAACTCACCTGGTTGCCCATTCTGATGGGGGGTCTTGGACCCCCACCAAAGCGAGGTGACATGAAAGGCTGCAAAACAAATCAACTTGTCAGAAAACTGTAACACTGACATATTGTCTGAATCCAATGAAGTTGCGACAAAAAGGATGCCTGCGAGAACATGGGATATCCACAGCTCAGCAGAGCAAGTTAACAGCAAAACAGCGAGAGAGAGAAACAACACAGAGGGCAGAACCGGTCAAATGAAAGTCCGTGAATAGACAGGAGCCGCTACCTGGCCGTGGGGTCCCATCATGCTGTTAGGGGGAGGAGGAGCGTGAGGGGAGGCCTGGGAGCCGGGAGGGCCCTAAGAAAGTGAAGAGACCACACGAGAGGAGAGCAGGTGCGAGAGACGAAGCAAGGGATATGTAGCAAGTGATAAAAAGGGCATTGGAGAAACAGGGATAATGAGAGAGACAGACAGAAGAGAAAGAAAAAAAAAAAAAAAGAGATTCATTAGGCTATTTAAAGGGCTGGAAAGAGAACAACACCACAGAACACAGTGAGAATCCTGTGTTCTGGATTCTCACCAAGTGAATGGTGGCTGAACAGCTAAACTCACACAAAGAGCAAAGCATTACAGATAAGTTCTAACAAATGAAACGGGTGAACAAGTAAGAGAACAAGTTAACATTTATGAAGAATACAACAGGAAAAGCCAACATTGGACTCAACAGTGACTAGTCAGAGCTGTGCCATCATTTTAAAACTTGTATTCACTACTAACTTTGTATATTTTGAAGGAGTTACCGAGAATACTGGAAACTTGTTGGCTGCTTTTCCCACAGTATCCTATATAATTAATAATTATTTTTAGAATTATTATAGGGATGCACCGAAATTTTGTCCGCCAAAAATTATCGGCCAAAAATGGCATTTTCGGTTTTTGGCTGAAAGAGAAAAGCGCCCGAAATATATGCCGCTAACCGACGCTCCGCTCAATATTATGCTCTATGCAAGTGCGCTCCGCTCAGCTGCTCAAGGCCCATGCGAATGCTCCACTCATGTACCCCTCATGCTCATCGGTAAAGCGAAGACATGTTTAGTCTGCTCAAATAACACACTGACATAATTTCTATGTAGTGGTATACATGTTTCTGTTTACCCTACTGTGCTGCTGTAACATGGTGTGGTATAGCCATGCTGGGCAACGCTGGTAAAATGACGCTACTCTCTCGTTCACTGATCCGCTCCCCTTATGTTCTGCTCACATGCTCTGATAATAGTTTTGTAGGACTACACATTATTTGGCTAATTGTTAAAAAAAAAAAAAAAACTTAAATCAGATTCTGTTGCTTAGAACTGAACAAAGAACAATATATTAATATTTTATTTTAAATATATTTTCTGACCAATTTTAGTGTTACTTTCAATAAAGGTGTGGTTATTTTATTAGCTTTTTTTAAACTCAGTATCATTAAAATTATTGAATTTCATTAAAAAAAAAAGTCTAATATTAATACAATTATACAAAAAAAAAAAAAAAAAGCCAATTTAAAATAAGAAATCATTTTTAATGAATCATTTTTGGTTGCGGTTTTTGGCCAAGTGCATCCAGAATTTTCGGTTTAGGCCCAGAATTTTCATATCACTGCATCCCTGAATTATTATAAAATAATGTATTGTATATTTTATATATGTATATACAAAATTTATAATTTTATGTCATAAAATAATTATAAAATAGTAATATTATATTATTTTAGAAAAAGAAAAAAAACCACACACACACACACAAAAAGGGTCTTTTAATGGTCTTAAAGTGTTAGTTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71560 True 2454 TUCP 0.41 6 3890095 3893793

Neighbor

gene id symbol gene type direction distance location
CI01000010_03882122_03883663 NA coding upstream 6333 3882122 ~ 3883762 (+)
CI01000010_03781620_03785840 GM11353, RPS8B, RPS8 coding upstream 104112 3781620 ~ 3786254 (+)
CI01000010_03778292_03781230 ELOVL8B coding upstream 108655 3778292 ~ 3781440 (+)
CI01000010_03770735_03776382 NA coding upstream 113528 3770735 ~ 3776567 (+)
CI01000010_03764993_03769503 NA coding upstream 120592 3764993 ~ 3769503 (+)
CI01000010_03902240_03911029 ACOT11 coding downstream 8313 3902106 ~ 3911455 (+)
CI01000010_03915860_03918633 FPGT coding downstream 22067 3915860 ~ 3919137 (+)
CI01000010_03920171_03935066 TNNI3K coding downstream 26378 3920171 ~ 3935859 (+)
CI01000010_03952874_03957173 NA coding downstream 59081 3952874 ~ 3957244 (+)
CI01000010_04010515_04020837 ST6GALNAC5B coding downstream 116722 4010515 ~ 4020898 (+)
G62788 NA non-coding upstream 43654 3818656 ~ 3846441 (+)
G62791 NA non-coding upstream 73590 3816031 ~ 3816505 (+)
G62748 NA non-coding upstream 132294 3757200 ~ 3757801 (+)
G62738 NA non-coding upstream 185894 3703989 ~ 3704201 (+)
G62868 NA non-coding downstream 69955 3963748 ~ 3964163 (+)
G62869 NA non-coding downstream 70860 3964653 ~ 3965140 (+)
G62871 NA non-coding downstream 72796 3966589 ~ 3981486 (+)
G62893 NA non-coding downstream 160802 4054595 ~ 4061190 (+)
G62895 NA non-coding downstream 198252 4092045 ~ 4095387 (+)
CI01000010_03320340_03346243 NA other upstream 558909 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 690187 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 2942551 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 3006581 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 3051663 826648 ~ 832705 (+)
G62856 NA other downstream 43964 3937757 ~ 3939945 (+)
G62983 NA other downstream 554379 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 747048 4640516 ~ 4683778 (+)
G63403 NA other downstream 1801652 5695445 ~ 5707085 (+)
G63405 NA other downstream 1814178 5707971 ~ 5717250 (+)

Expression


Co-expression Network