CI01000010_04640858_04683752 (OSBPL9)


Basic Information

Item Value
gene id CI01000010_04640858_04683752
gene name OSBPL9
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4640516 ~ 4683778 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04640858_04683752.mRNA
GTATATATAGCCACCATGTAAAATAAAACATCTTTTAGACAGTATTTATCACAAATTTCCCAGACCTTCCAGTATATTAGCCTACTACATTTAACATATGCATAGCTTTGTTAGTTTTCATAACTGTTCCATTTCCACTGTTTGACTTGTTATGATTCTAATATTAACTTTGTGCAGCTTCGTTCAAATGCAAATAAACACTCTATCTTATGTAATATGCAAGTTATTAGTTCCAGAAGTCATCCTTGTATTAAAGTAAACCATAGTTCAGCATGTGACGTCAGACGCATGGTTTTTCTCGCCGCGCACTCCTCCCCGCGAGCACTCAGGCAAAGTGTAAAAATGGCGTCCATCATGGAGGGGCCGCTGAGCAAATGGACTAACGTCATGAAGGGGTGGCAGTATCGCTGGTTCGTACTGGACTATAACGCCGGGTTGCTGTCATATTATACTTCCAAGGACAAGATGATGCGTGGCTCTAGAAGAGGCTGTGTGCGACTTCGGGGAGCTGTGATTGGAATCGATGACGAGGACGACAGCACTTTCACCATTACCGTGGACCAGAAGACTTTCCATTTTCAGGAGCAGGGTGGAGTGATTTGTAAAATACTTGACTGGGGAGAGAAAAAACAGACAGCGTTTAAAAGCTCTCAGCGTCAGACACTGAGCTCCTGCTGGCAATGGATCAACATTTGCATTCATGCTCCTGAGGGGAAAGAAATAACAGAAAGGGAGAAAAGACATGGAACATTTGCATGGATGAAGAATGAGCTACTGATCTCTCGTTTTCTTGCATACTGTTGGGGTGTCGTTAGAAGGGCACATTGCATAAGGTGCCCTAATTCGACTGTGAAGTCCACCATTGCCCTCCAGAGACACACTCCACCTTTTTCTCAGTATGTAGGATCTAGGACATTGATTTCAAGCATGTTCCATAGATGTGCGATGGATTTTGTGGTCCTGTGCGAACGAATGCTGCTGTATTTAACAAGCAGGAAAACCAGATCCGACAACAGAGCTGTAGTTACCGTTGTCACATTTACAGTTCCACAGCAGGGTCATTCTCCACTCTCCATTTCATGCGCCGTGTGTTTGCGGTCCGTCTGCTTATTACTAATGGATGTGTTTTTGGATGTTTGCCCCTCAGCCCGTGACGCAGATGAGCGGGAGAAGTGGATTCATGCCTTAGAGGGGACGATTCTACGCCACACCCTTCAGCGGCTACCACGTAGCTCTCAGCATGCCGCAGCTTTTCTCCGCCAGAGCACCATAAACCCAGTGGATGGGGTATTCCAGCCTACCCCTCTCAACCCCTCTGTAGTCAGTGCCAGTGCCATGCCAACGCAGACCACTCTACCCACAGATGGAGCTCAGGTGTGTAAAACGGAACAGAGGCCTTCTTCTTTACCCGTAGGCCCTGTTGTCACGGTGATGGGGAGCCTTCAGACTCCCACTCCCAACAGCACAGGGAGTGGTCCTTCAGCTCCCAGCAGCAGCGTGACTTCACCCAGTCACATGAACTTACCACCCCACACTGTTCCTGACTTCTCCTATTCCAGCAGCGAAGACGAGTTTTACGACGCAGATGAGTTTTATCAGAGTAGCACCTCACCGAAACACTGCATAGATCCGAACAGAACATCTGCTGTGACCCATAAAGACAGCACAGTCCTGAAACGGCCAGACACCAACGATTCAATCAACTCCTCCATGTCGAACGGCACCACTGATGCAGATCAGTTTGACAGTCATGATGAGAGAGATGATGATGGCGAAGGTGAATCTGTTGAAGAACACAAAAGTGTCATCATGCATCTGCTGTCTCAAGTGCGACTGGGCATGGATCTCACCAAGGTCGTCTTGCCGACATTTATCTTGGAGCGGAGGTCGCTGCTGGAAATGTATGCAGATTTCTTTGCACACCCGGATTTGTTTGTAAGTATTGCAGAGCAGCAGGATCCAAGGGACCGCATGGTGCAGGTTGTAAAGTGGTACCTCTCAGCCTTTCACGCTGGTCGGAAAGGATCTGTGGCCAAGAAGCCCTACAACCCCATTCTGGGCGAGGTGTTCTTCTGTCATTGGGACCTGCCCTTGGAAACAGAGGATCCTGCTGCTTCTGAGTCTGTATCAGATGGGCCAGTGCCGTGGAGTAGCAAAAACAGTGTGTCATTTGTGGCAGAGCAGGTTTCTCACCACCCTCCTATATCTGCGTTTTATGCTGAGTGTTACAGCAAGAAAATCCAATTCAATGCCCACATCTGGACGAAATCGAAATTCCTTGGAATGTCAATTGGTGTCCATAATATTGGTCAAGGTTGTGTGTCTTGTCTTGAATATGATGAACACTATATTCTTAATTTTCCCAATGGCTATGGGAGGTCAATCCTCACTGTTCCTTGGGTTGAGCTGGGTGGGGAGTGCAATATTTCCTGTTCCAAATCTGGGTACAGTGCCAATATAGTTTTCCACACCAAACCCTTCTATGGAGGAAAGAAGCACAGGATAACTGCTGAGATATTTGCTCCCAATGATAAGAAGTCATACTGCTCCATAGAAGGAGAGTGGAATGGTGTGATGTATGCAAAATGGGCTACCGGGGAAAATGCTGAATTTATTGACACAAAGAAATTGGGCATTGTTAAGAAGAAGGTACGGAAATTGGAGGACCAGTTGGACTATGAATCCAGAAGTTTGTGGAAGGACGTGACAGTGAACCTGAAACTCAAGGACATTGATGCCGCGACGGAGGCCAAACACAGGCTGGAGGAGAAACAGAGGGCGGAGGCCAGAGAGAGGAAGGAGAAGGAAATGCAATGGGAGACGAGAGCCCAGTTTCTTGAAGACTTTAATAAAGGCGGGAGACAGCAGGCCCAGTTTCTTGAAGACTTTGATAAAGGTGGGGGACCACAGGAATGGAGTGTATCTGAAGCAATGCTACATTTGTCCAAGCATGAGAACTGTATGGGCGCAATCCTATCTGGTGTCTGCTCATTGACAGTGCCTACTGGGGACATTTGGTCAGGGTTTCCCCAGTACTACACTGGCATGCTGACTGCTTGGTACTGCAGCCTGGGTCAGTGCTGTGATTCAGGGGACTGTAGGATTACAAATAACATCACAGGATTGGAGAGAGATCTACAGGTAAAGCTCCACGGGCAGCACCTGGCCCAGTCTGTGGTTCTGAAAGCGATTCAAGGATTCATCAAAAACCCTGAGTCCAACAAACCACTGACTCTGTCCTTTCACGGCTGGTCTGGGACAGGCAAGAACTTTGTGGCCCGGATAGTAGCGGACAACCTGTACCGGGATGGTATAAAGAGCGAATGCGTCCGTTTGTTCATTGCCCCATTCCACTTCCCACATGCGAGATTGGTGGACGTGTACAAGGGCCAGCTGAGAGAAGCCATTCGAGACCTGGTTCTGCGGTGCCCACAGACTCTTTTTATCTTTGATGAGGCAGAAAAGCTTCATCCAGGACTCATCGATGCCATAAAGCCCTACATGGACCACTATGATAATGTGGATGGGGTCAGCTATAGGAGAGCCATATTTCTGTTCCTAAGCAATATCGGTGGTGCTGCCATCAATGAGGTGGCACTGGATTTCTGGCACTCGGGACAGAATAGGGAAGATATCGGCATGGAAGACTTGGAACATCTTCTGCGGGCTGAAGCCATGGAGGCAGAAGGAGGTTTTGCACAGAGCGAGCTGATGTCAGGCCATCTTATTGACTTCTTTGTACCGTTCTTGCCGCTGGAGTACCGGCATGTGAAACTGTGTGCACTTGATGCATATGCAGCTCGTGGCCTTCAGCCGGATGAGGGGACGCTGGATGAAGTGGCCAAAGCCATGATGTATGTTCCTAAGGAGGAGAAACTCTTCTCTGCACAGGGCTGCAAATCCATTCCTCAAAGGATCAATTTCTTTCTACCATAACGGAGCGTAACATAAAATCACTGACA
>TU71841
TCAGGCAAAGTGTAAAAATGGCGTCCATCATGGAGGGGCCGCTGAGCAAATGGACTAACGTCATGAAGGGGTGGCAGTATCGCTGGTTCGTACTGGACTATAACGCCGGGTTGCTGTCATATTATACTTCCAAGGACAAGATGATGCGTGGCTCTAGAAGAGGCTGTGTGCGACTTCGGGGAGCTGTGATTGGAATCGATGACGAGGACGACAGCACTTTCACCATTACCGTGGACCAGAAGACTTTCCATTTTCAGGCCCGTGACGCAGATGAGCGGGAGAAGTGGATTCATGCCTTAGAGGGGACGATTCTACGCCACACCCTTCAGCGGGTAAGAGCCACATCTAGGCCACATGTACCATGATTACACCTCAGTCAGACTGGTAAACAATCTTCTCTAAATTATGCTTAAAGACCTCATTACATTTTGGGGGGATGTTTTGTGACTTTTATTCCATGTCTGTTCATTTTGAGTTCATCTATATGCTATATGATGTACTCTCCCTAGATGTGTACAGTAAAAGTTTTTTAATATTATTACTGTTTTTTTTTTTATTACAATTTTTAAAAACTATAAAATAGATTTAAAAAATTTATTTTTAAAAATGTGTTTCCTTGCACTTTGCACTTGATGTGCTCTGTACTGTCGGAGGAAACCAGGACAGGGTATTTTTACTTAGTTTCTCATCTTATTTTTTCCTCATTTCTTGTAAATAATCTTATCATTTTTCAGGCTCACTTTTGTCCTCTGCCTCTGTATTCTTTTTCTCATCCTTTCCTCTCAAAGGTCTCTCTGTTCCATCTCCACCTTAGCTTTGTTTAAAAAAAAAAAAAAAAAACCTGCTGACAGGCATCTGCGTGTACCCACTCGCAGAATGTGCGCAGCTATCCGGTCACATGATCTCTGACAGCCAATCACAGCTTTGCTTATTCAGCCAGCCCCTCCTTGCAGCAGATGGCAGATCCAATCACAGCACTGTATTGTGTTTTCTACAGTCTGTAAGGTTAATGCTTCTTTCTCTTCTGCTTTTTTTTTTCTTTTTCTTTTGAGGAAGTCCTCTTCCTGGTCAAGAGTGGTTTATAGAACAGCTCTGAGTTCAGCCGACAAGCCGATAGGTATTTGTTCACCTTATACGCCCCTCCTTTAGAGGGGAAACTTACAGGAAAGGGTGTGTGGACTGATACTGAAGTGTTTCTGTAAGTTTGGGTCAGATTTGTGGAGGAATGTCCTGCAGTGGCAAGAACCGAGTGAGTACCTTTGTTTTGTTGAAGTTTACTGATGCGTTAAATGGGTCACTCTCTGTTTGTGTATGAGTGTGTACAGGTAGGGGTGGGTGAGCGTGTGTTTATGAAAGTAGGGAAGCATTTGTTTGTGCAAATAGAGAGGGCATGGGTCACAGTTGAATGCGTAGTTACTTTTCTGCTAGCTTGTGATTTGTAATCTCAGCCATATCATACATGTACGGTCTGTGTTGACATAATAGAGCACATGACTTTAAGTAAGATTTGTGGGTTAGCTTTTCAAATGTCTCACTGGTGGGTTTGTCTCCTAAAATGCACAAAGATAGCCTGTACACCTCAGATTGCCCAGCTGATTCATATTGAAACACTTCTCTTTGCAGTCGTGTTGGATGTTCAGATTTTCTGCTATGAGTCAGACTGAAGGAGTGAGTCAATGGGAACTGCTTCCTGTCTGTACAGTCTGTATGTTCAGGTGTGTGTTAACAGCTACCACGTAGCTCTCAGCATGCCGCAGCTTTTCTCCGCCAGGTACAGGATAAAATAATTATGTAATGCTCTCTGAGGGTCGCAAATGCTCATTAAGAGGTATTTCGTTAATTTGTTCAAGCCAAAACAGCAGATCTCAGGGGTTGCTGGGAGGTGAGATGTTTATGATGCCTGTAGGATATGACCAGGCATGTGTTCCTGTACTTCGCTGGTCGAGAATTGTGGTTCAATTCCCAGGGAACATGCATTATGAGAAAAGCGATTGCCAGATACTTATCAGTTAAATTACAAATCTGATGGTCCCTTAATCAGAAATGGACCCTTATGTTGATTTTTAAGTTTAAGTCGGAAATACTACTTAACCTATGATGTTTTTCTTGACATTTTGTGACTTTCTCATTTAAGGTCATAAACATGGCTGCAAATTGTGGACACACTGATGTGTTGTGGAATGTGTGTACAAAATTTATATTACAATTGTAATGTTTGTGGGTCAGTTTGACCCGTATATTTTGTTTGTTTAAAAATGTTTACAGTACTGTTTGTATTATTCATAGTTTGTTAACAAAGTAATTAACAAAGTTGTTAAATACAGTTTTAAAAGTCATATGTTCTCATGTATGTTTTGTAATTTGTGAGAAGTGTTAATGTTTTGTTTTTTTTTCACATTGATTTTTGGTGAATTGTATTGAATCCAATTACAATCCATAATGACCGTACCCAGATATTTTTATCATAATACAACAATAATTACCTTTTGGATAAATATGTTTTAGTCACATAAAAGAGCAGCAATGTAGCTGTTAAGATGCTAGTTTGCCAGAAACATACTATTAAAGGGATAGTTCACCCTAAAATGAAAATTCTGTCATCATTTACTCACCCTCAAGTTGTTCCAAACCTGTATGAGTGTCTTTCTTCTGATGAGC
>TU71842
TCAGGCAAAGTGTAAAAATGGCGTCCATCATGGAGGGGCCGCTGAGCAAATGGACTAACGTCATGAAGGGGTGGCAGTATCGCTGGTTCGTACTGGACTATAACGCCGGGTTGCTGTCATATTATACTTCCAAGGACAAGATGATGCGTGGCTCTAGAAGAGGCTGTGTGCGACTTCGGGGAGCTGTGATTGGAATCGATGACGAGGACGACAGCACTTTCACCATTACCGTGGACCAGAAGACTTTCCATTTTCAGGCCCGTGACGCAGATGAGCGGGAGAAGTGGATTCATGCCTTAGAGGGGACGATTCTACGCCACACCCTTCAGCGGGTAAGAGCCACATCTAGGCCACATGTACCATGATTACACCTCAGTCAGACTGGTAAACAATCTTCTCTAAATTATGCTTAAAGACCTCATTACATTTTGG

Function

symbol description
osbpl9 Predicted to enable sterol binding activity and sterol transporter activity. Predicted to act upstream of or within lipid transport. Predicted to be active in cytosol; intracellular membrane-bounded organelle; and membrane. Orthologous to human OSBPL9 (oxysterol binding protein like 9).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K20465 OSBPL9_10_11, ORP9_10_11; oxysterol-binding protein-related protein 9/10/11

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04640858_04683752.mRNA False 3962 mRNA 0.48 33 4640516 4683778
TU71841 False 2658 TUCP 0.39 4 4640841 4653993
TU71842 True 432 TUCP 0.50 4 4640841 4651767

Neighbor

gene id symbol gene type direction distance location
CI01000010_04614357_04631136 NA coding upstream 9056 4614229 ~ 4631460 (+)
CI01000010_04609294_04611679 NDUFAF2 coding upstream 28806 4609189 ~ 4611710 (+)
CI01000010_04534309_04549864 NA coding upstream 90557 4534178 ~ 4549959 (+)
CI01000010_04437892_04443935 RAB3C coding upstream 196070 4437429 ~ 4444446 (+)
CI01000010_04377762_04378990 MRPS36 coding upstream 261434 4377147 ~ 4379082 (+)
CI01000010_04686730_04692395 CALR coding downstream 2882 4686660 ~ 4692633 (+)
CI01000010_04696294_04717129 EPS15 coding downstream 12516 4696294 ~ 4717222 (+)
CI01000010_04735645_04749008 TTC39A coding downstream 51867 4735645 ~ 4749224 (+)
CI01000010_04753467_04770912 RNF11L2, RNF11B, RNF11 coding downstream 69453 4753231 ~ 4771674 (+)
CI01000010_04803003_04849985 FAF1 coding downstream 119225 4803003 ~ 4849985 (+)
G63058 NA non-coding upstream 49377 4590169 ~ 4591139 (+)
G63078 NA non-coding upstream 68022 4572277 ~ 4572494 (+)
G63070 NA non-coding upstream 83217 4556992 ~ 4557299 (+)
G63069 NA non-coding upstream 85535 4554752 ~ 4554981 (+)
G63056 NA non-coding upstream 88113 4552199 ~ 4552403 (+)
G63096 NA non-coding downstream 88443 4772221 ~ 4773699 (+)
G63131 NA non-coding downstream 195246 4879024 ~ 4879521 (+)
G63134 NA non-coding downstream 217655 4901433 ~ 4901642 (+)
G63149 NA non-coding downstream 262687 4946465 ~ 4946668 (+)
G63151 NA non-coding downstream 269764 4953542 ~ 4953763 (+)
G62983 NA other upstream 191189 4448172 ~ 4449327 (+)
G62856 NA other upstream 700571 3937757 ~ 3939945 (+)
G62838 NA other upstream 746723 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1309330 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1440608 3197380 ~ 3200044 (+)
G63403 NA other downstream 1011667 5695445 ~ 5707085 (+)
G63405 NA other downstream 1024193 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1073175 5788332 ~ 5790204 (+)
G63524 NA other downstream 1690780 6374558 ~ 6374667 (+)
G63572 NA other downstream 1902150 6585928 ~ 6617806 (+)

Expression


Co-expression Network