G63058


Basic Information

Item Value
gene id G63058
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4590169 ~ 4591139 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71816
TACAGCATTTATTTTTTTCATAAATATTTAAAACAGTCAATTAACAAACTAAATTTATACAAAAATTGCAGGCTCCTGTCCTGGACAAAAGAGCCCAAGACATTCATTACGACACGATGTATAAAATAAAAAGGTAACCAAATTCCGGTCCTTCTTCACCAATAGTGCAAGATGAGATCAATGCATCGGTTCCTTCAAGGACAGTTTCAGTACTTGCTACCATTCACGCAATGTCACATGTAGAGGGTGAAAAACACAAAAATATGCATTACGGATATAGCACCTAGTGTTTGTTGTAGGATTTTCTCCACAGTTCTGCTTTTTTCGAAGGGAGAGAAGGGGAAAAAAAAAAAATTCTCCATCTTATTTACTGATATAACCAAGAACAGGAACATAAATATCTAAATATATCAATAAAAAAAAAAAAAATGGCAATAAAAGTGAGGTGACTGACATGAGTGAGGAGCTGGGAGGCTTCGGACTCATTCACCTCTCATTAAACAGGGAGGGGAAACACGTGAGAATGCAGAAAATAAGTAGAAACAGGAGCAGCCCTTAAGGCGAATGACCTACAGTTCAACTCAAATGCCCAGCAGAGGTTAGAAGACAAGATCCAGCCCAGACTGAAACACACAGTCTGAAGTAACATTTTTCCTAGGGCATCAAGATAAACTTTATGGTGTACTTATAAATATGCTTATAAAAATGTAGCCAAAAAACTGTTTTAGGTAGATTGTCACTGCTGATTGGTTAGTCACACTGCACCAGTTATTCTTTCTTGTGGTGTATGCCATTGTTGTTCTGTGGCAAGGTTGTGTTTTGCAGGACTTTAGGAAGCCTTTTGCCTTTTGTGTATGCATGGTACCAGAAGTTGAGGAAGAGGAGGAGGAAGACGATGCCGTACAGAGTAATGAGGTAGATGAAGATGGGGTACGGGTAAGGACAGTCTTTCATGAAGTAATACTGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71816 True 971 lncRNA 0.39 1 4590169 4591139

Neighbor

gene id symbol gene type direction distance location
CI01000010_04534309_04549864 NA coding upstream 40210 4534178 ~ 4549959 (+)
CI01000010_04437892_04443935 RAB3C coding upstream 145723 4437429 ~ 4444446 (+)
CI01000010_04377762_04378990 MRPS36 coding upstream 211087 4377147 ~ 4379082 (+)
CI01000010_04368541_04374080 NA coding upstream 215995 4368471 ~ 4374174 (+)
CI01000010_04165584_04232583 SKIA, SKI coding upstream 357586 4165584 ~ 4232583 (+)
CI01000010_04609294_04611679 NDUFAF2 coding downstream 18050 4609189 ~ 4611710 (+)
CI01000010_04614357_04631136 NA coding downstream 23090 4614229 ~ 4631460 (+)
CI01000010_04640858_04683752 OSBPL9 coding downstream 49377 4640516 ~ 4683778 (+)
CI01000010_04686730_04692395 CALR coding downstream 95521 4686660 ~ 4692633 (+)
CI01000010_04696294_04717129 EPS15 coding downstream 105155 4696294 ~ 4717222 (+)
G63078 NA non-coding upstream 17675 4572277 ~ 4572494 (+)
G63070 NA non-coding upstream 32870 4556992 ~ 4557299 (+)
G63069 NA non-coding upstream 35188 4554752 ~ 4554981 (+)
G63056 NA non-coding upstream 37766 4552199 ~ 4552403 (+)
G63053 NA non-coding upstream 45311 4544659 ~ 4544858 (+)
G63096 NA non-coding downstream 181082 4772221 ~ 4773699 (+)
G63131 NA non-coding downstream 287885 4879024 ~ 4879521 (+)
G63134 NA non-coding downstream 310294 4901433 ~ 4901642 (+)
G63149 NA non-coding downstream 355326 4946465 ~ 4946668 (+)
G63151 NA non-coding downstream 362403 4953542 ~ 4953763 (+)
G62983 NA other upstream 140842 4448172 ~ 4449327 (+)
G62856 NA other upstream 650224 3937757 ~ 3939945 (+)
G62838 NA other upstream 696376 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1258983 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1390261 3197380 ~ 3200044 (+)
G63403 NA other downstream 1104306 5695445 ~ 5707085 (+)
G63405 NA other downstream 1116832 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1165814 5788332 ~ 5790204 (+)
G63524 NA other downstream 1783419 6374558 ~ 6374667 (+)

Expression


Co-expression Network