trnav-cac_44


Basic Information

Item Value
gene id trnav-cac_44
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8951493 ~ 8951565 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-cac_44
gtttctgtagtgtagtggttatcACGTTCGCCTCACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac_44 True 73 tRNA 0.51 1 8951493 8951565

Neighbor

gene id symbol gene type direction distance location
trnav-aac_54 NA coding upstream 118 8951303 ~ 8951375 (+)
trnav-cac_43 NA coding upstream 308 8951113 ~ 8951185 (+)
trnav-aac_53 NA coding upstream 498 8950923 ~ 8950995 (+)
trnav-cac_42 NA coding upstream 688 8950733 ~ 8950805 (+)
trnav-cac_41 NA coding upstream 878 8950543 ~ 8950615 (+)
LOC103023391 hcn3,LOC108437924,LOC107739502,LOC107656480,LOC107599514 coding downstream 387552 9339117 ~ 9348717 (+)
LOC111195503 NA coding downstream 593135 9544700 ~ 9559107 (+)
LOC103027509 NA coding downstream 608998 9560563 ~ 9590910 (+)
LOC103047595 cers2,LOC103047595,LOC108437916,LOC107750802,LOC107599505,LOC107693338,LOC107678801,LOC107739494 coding downstream 690612 9642177 ~ 9677820 (+)
LOC103044437 trim46,trim46b,LOC108437912,LOC108272350,LOC107589413,LOC107750805,LOC107693334 coding downstream 1035237 9986802 ~ 10014297 (+)
G196314 NA non-coding upstream 20134 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 101867 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 147647 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 155107 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 170537 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 386504 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 426352 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 430185 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 655957 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 760325 9711890 ~ 9712641 (+)
G196232 NA other upstream 271523 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 546024 8143873 ~ 8405469 (+)
G195793 NA other upstream 1657800 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1824379 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 2004337 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 582864 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 651762 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 749175 9700740 ~ 9704709 (+)
G196415 NA other downstream 769218 9720783 ~ 9721270 (+)
G196419 NA other downstream 788794 9740359 ~ 9740768 (+)

Expression


Co-expression Network