G132148


Basic Information

Item Value
gene id G132148
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 15279797 ~ 15280147 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU178731
cctaggggtgggaatcgattactatctcacgattcgattcgattccgattttgggggccacgattcgattcaaaatcgatttttgattcaaaacgatttgaattataaaaatttctgcttctggcttatgaatcttattgaaaaaaaaccctccataatatacactggtcctggagcaagtaatgtgttacaaaaacaataaaatgtgcaggaatgtgggtcctcagtgacagaggaatcactgggatatcacaatgacgttaatgaacaataaataaataataaataacactgctttattaccaggctactagcggtggtgtgtaggtgacgctgctgggctgatgtgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178731 True 351 lncRNA 0.38 1 15279797 15280147

Neighbor

gene id symbol gene type direction distance location
spen spen,LOC107737540,LOC107591084,LOC107716126,LOC107593929 coding upstream 43581 15195555 ~ 15236216 (+)
tmem82 tmem82 coding upstream 89377 15184896 ~ 15190420 (+)
LOC103024219 NA coding upstream 96230 15182350 ~ 15183567 (+)
LOC103029072 NA coding upstream 101757 15174123 ~ 15178040 (+)
atp13a2 atp13a2 coding upstream 111838 15129011 ~ 15167959 (+)
epha2 epha2,epha2b,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107593930,LOC107716125 coding downstream 11181 15291328 ~ 15329316 (+)
hspb7 hspb7,LOC107591086,LOC107578967,LOC107716085 coding downstream 154613 15434760 ~ 15440599 (+)
zbtb17 zbtb17,LOC107737543,LOC107591087 coding downstream 163233 15443380 ~ 15456553 (+)
plekhm2 plekhm2 coding downstream 187225 15467372 ~ 15490494 (+)
LOC103029593 ano7l1,ano11,LOC107591089,LOC107737547,LOC107716119 coding downstream 224634 15504781 ~ 15529128 (+)
G132115 NA non-coding upstream 98942 15178856 ~ 15180855 (+)
G132110 NA non-coding upstream 132714 15146348 ~ 15147083 (+)
G132081 NA non-coding upstream 554727 14724646 ~ 14725070 (+)
LOC111194092 NA non-coding upstream 1064980 14212780 ~ 14214817 (+)
G131937 NA non-coding upstream 1178484 14096615 ~ 14101313 (+)
G132154 NA non-coding downstream 103327 15383474 ~ 15387536 (+)
G132158 NA non-coding downstream 107781 15387928 ~ 15394416 (+)
G132205 NA non-coding downstream 202781 15482928 ~ 15483289 (+)
G132211 NA non-coding downstream 250984 15531131 ~ 15531469 (+)
G132231 NA non-coding downstream 256557 15536704 ~ 15537444 (+)
G132146 LOC106581475 other upstream 39400 15240080 ~ 15240397 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other upstream 106900 15168008 ~ 15172897 (+)
G131677 NA other upstream 2338950 12913491 ~ 12940847 (+)
sall4 sall4 other upstream 2516087 12689154 ~ 12763710 (+)
LOC103031050 NA other upstream 2945707 12240696 ~ 12334090 (+)
fam131c fam131c other downstream 84243 15364390 ~ 15397569 (+)
ddost ddost,LOC107673085,LOC107687429 other downstream 179715 15459862 ~ 15466085 (+)
LOC103031494 NA other downstream 450750 15730897 ~ 15737781 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other downstream 2199791 17479938 ~ 17524353 (+)
snrpg snrpg other downstream 2226304 17506451 ~ 17509815 (+)

Expression


Co-expression Network