G134308


Basic Information

Item Value
gene id G134308
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24229176 ~ 24229459 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU181668
gattagtgctggacgatatggccaaaatttatatcacgatatattccttaaatttcggtcgatacgatataatttcgatatcgataaatactttgaaggcctcagaaaaagaatccctgcaatctctgcagcttgcactgcaaatttaaattattatttaactgtgtatttgcactttttgtatcaatctatctaatggaaatctgtacctactactgtatgaaaatgttttttaagtctttgaaacctcctttcacaaaaactttaatactttagaaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181668 True 284 lncRNA 0.30 1 24229176 24229459

Neighbor

gene id symbol gene type direction distance location
fam120c fam120c,LOC108436345,LOC107741318,LOC107657034,LOC107562475,LOC107672004 coding downstream 61374 24141054 ~ 24167802 (-)
hsd17b10 hsd17b10,LOC107560905,LOC107737644,LOC107562460,LOC107741341 coding downstream 100494 24121383 ~ 24128682 (-)
LOC103046267 fam19a1,LOC108436303,LOC107560881,LOC107741340,LOC108275576,LOC107657002,LOC107563677 coding downstream 198856 23872012 ~ 24030320 (-)
LOC107197627 LOC108275538,LOC108435216,LOC106572401 coding downstream 411204 23812318 ~ 23817972 (-)
LOC103022153 nucks1,LOC108435247 coding downstream 417766 23804240 ~ 23811410 (-)
LOC111194122 ssr4,LOC108436301,LOC108275956,LOC107671948,LOC107737640,LOC107741342,LOC107562474 coding upstream 103309 24332768 ~ 24336769 (-)
ikbkg ikbkg coding upstream 109229 24338688 ~ 24350054 (-)
LOC103043623 LOC108436300 coding upstream 123500 24352959 ~ 24358129 (-)
LOC103041866 LOC108436338,LOC107672018,LOC107560914,LOC107737637,LOC107741320,LOC108276080 coding upstream 129931 24359390 ~ 24408380 (-)
LOC103041050 LOC108436299 coding upstream 190183 24419642 ~ 24425384 (-)
G134307 NA non-coding downstream 222 24228592 ~ 24228954 (-)
G134305 NA non-coding downstream 22088 24206769 ~ 24207088 (-)
G134301 NA non-coding downstream 38219 24188185 ~ 24190957 (-)
LOC111194022 NA non-coding downstream 94999 24129814 ~ 24134177 (-)
G134253 NA non-coding downstream 360477 23868224 ~ 23868699 (-)
G134311 NA non-coding upstream 13058 24242517 ~ 24242774 (-)
G134314 avpr2ab,LOC108436342,LOC107672002,LOC108425559,LOC107657032 non-coding upstream 47052 24276511 ~ 24277046 (-)
G134377 NA non-coding upstream 131859 24361318 ~ 24378393 (-)
G134378 NA non-coding upstream 132684 24362143 ~ 24362833 (-)
G134379 NA non-coding upstream 140920 24370379 ~ 24371479 (-)
G134093 prim1,LOC107741309 other downstream 598021 23624281 ~ 23631155 (-)
LOC103034468 cdc42,LOC107083933,LOC103386293,LOC100697482,LOC107395067,LOC108435227 other downstream 1312792 22909821 ~ 22916384 (-)
LOC103038244 NA other downstream 1327544 22890646 ~ 22901632 (-)
LOC103040235 fkbp1ab,fkbp1a,LOC108435222,LOC107707744,LOC105013763,LOC100705189,LOC101476936,LOC107657066,LOC103384692,LOC107747971 other downstream 1381265 22839397 ~ 22847911 (-)
LOC103040989 LOC108438207,LOC108276489 other downstream 4917132 19198350 ~ 19312044 (-)
G134312 LOC108436342 other upstream 43285 24272744 ~ 24273069 (-)
LOC111194023 NA other upstream 201700 24431159 ~ 24433471 (-)
trpc4ap trpc4ap,trpc4apb,LOC107741324,LOC107737634,LOC107562468,LOC107672047,LOC107560917 other upstream 254506 24483965 ~ 24494425 (-)
LOC111194123 NA other upstream 392158 24621617 ~ 24631857 (-)
ebp ebp,LOC107672060,LOC107712744 other upstream 577454 24806913 ~ 24809335 (-)

Expression


Co-expression Network