G134378


Basic Information

Item Value
gene id G134378
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24362143 ~ 24362833 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU181770
gctggctatgctgctaaccctggctgagtagcgctgctaactgagCTGGCTAGTGCTGCCAACCGAGGCTGGCTAATGCTGCCAACCgaggctggctagtgctgctaaccgtagctggctatgctgctacccggggctggctagcgctaaTAACCAGGGCTGGATAACACCGATAACCgtagctggctatgctgctaactgctGCTAGCGCTCATGCatggacaaaatactggaattctaagcttactgtaaataaatgaaagcgctttacttacccaaatacagttttcaggagagaaatctgtgtagattaagatTCAGGGCTCAATTAACTTTGAAAGATAATAatatcaaaaaattaaaaaaaataatattaaaatctggtgcaccttatagtccaacAAAATGCTATATTATAAAGATCAACTGAAACAAAGCAGccaaatgctaaataaaaatgaCTGTAGTTACTGTTTTGATAGTACATCGAAAATGTAGCACTTATGGTTCTTTATAACATACTGTGTACTGTGAAGGTTTCTTGGagtattgtta

Function

GO:

id name namespace
GO:0015081 sodium ion transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181770 True 555 lncRNA 0.41 2 24362143 24362833

Neighbor

gene id symbol gene type direction distance location
LOC103043623 LOC108436300 coding downstream 4014 24352959 ~ 24358129 (-)
ikbkg ikbkg coding downstream 12089 24338688 ~ 24350054 (-)
LOC111194122 ssr4,LOC108436301,LOC108275956,LOC107671948,LOC107737640,LOC107741342,LOC107562474 coding downstream 25374 24332768 ~ 24336769 (-)
fam120c fam120c,LOC108436345,LOC107741318,LOC107657034,LOC107562475,LOC107672004 coding downstream 194341 24141054 ~ 24167802 (-)
hsd17b10 hsd17b10,LOC107560905,LOC107737644,LOC107562460,LOC107741341 coding downstream 233461 24121383 ~ 24128682 (-)
LOC103041050 LOC108436299 coding upstream 56809 24419642 ~ 24425384 (-)
nsfl1c nsfl1c,LOC107741325,LOC107562467,LOC106566439,LOC107657023 coding upstream 141521 24504354 ~ 24510554 (-)
fam110a fam110a coding upstream 208590 24571423 ~ 24605346 (-)
bcl2l1 bcl2l1 coding upstream 299782 24662615 ~ 24703952 (-)
arfgef2 arfgef2,LOC108436330,LOC107671990,LOC107737629,LOC107562465 coding upstream 342914 24705747 ~ 24748112 (-)
G134314 avpr2ab,LOC108436342,LOC107672002,LOC108425559,LOC107657032 non-coding downstream 85097 24276511 ~ 24277046 (-)
G134311 NA non-coding downstream 119369 24242517 ~ 24242774 (-)
G134308 NA non-coding downstream 132684 24229176 ~ 24229459 (-)
G134307 NA non-coding downstream 133189 24228592 ~ 24228954 (-)
G134305 NA non-coding downstream 155055 24206769 ~ 24207088 (-)
G134379 NA non-coding upstream 7546 24370379 ~ 24371479 (-)
G134413 NA non-coding upstream 162246 24525079 ~ 24525572 (-)
G134414 NA non-coding upstream 179640 24542473 ~ 24542852 (-)
G134496 NA non-coding upstream 290551 24653384 ~ 24654091 (-)
G134497 NA non-coding upstream 291333 24654166 ~ 24656572 (-)
G134312 LOC108436342 other downstream 89074 24272744 ~ 24273069 (-)
G134093 prim1,LOC107741309 other downstream 730988 23624281 ~ 23631155 (-)
LOC103034468 cdc42,LOC107083933,LOC103386293,LOC100697482,LOC107395067,LOC108435227 other downstream 1445759 22909821 ~ 22916384 (-)
LOC103038244 NA other downstream 1460511 22890646 ~ 22901632 (-)
LOC103040235 fkbp1ab,fkbp1a,LOC108435222,LOC107707744,LOC105013763,LOC100705189,LOC101476936,LOC107657066,LOC103384692,LOC107747971 other downstream 1514232 22839397 ~ 22847911 (-)
LOC111194023 NA other upstream 68326 24431159 ~ 24433471 (-)
trpc4ap trpc4ap,trpc4apb,LOC107741324,LOC107737634,LOC107562468,LOC107672047,LOC107560917 other upstream 121132 24483965 ~ 24494425 (-)
LOC111194123 NA other upstream 258784 24621617 ~ 24631857 (-)
ebp ebp,LOC107672060,LOC107712744 other upstream 444080 24806913 ~ 24809335 (-)
trnah-gug_15 NA other upstream 447598 24810431 ~ 24810502 (-)

Expression


Co-expression Network