G134413


Basic Information

Item Value
gene id G134413
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24525079 ~ 24525572 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU181813
TAAGCTACCGCGCGGACCGCGACGCCGGCCTCTCGGGCAAAGTACgtggaggtggggtgtgtgtttacatcaacacagcatggtgtaacaacgctgcgctgatctccagctactgctcgccgctggtggagtttgctgtagtcagagccaggccattctacctgcccagagagcttagcagcgtctacataatagcagtgtatgtagcacccagtgctaatgctaacgctctgcaagaactgtacactgttatctccaaactccagaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181813 True 270 lncRNA 0.54 2 24525079 24525572

Neighbor

gene id symbol gene type direction distance location
nsfl1c nsfl1c,LOC107741325,LOC107562467,LOC106566439,LOC107657023 coding downstream 14525 24504354 ~ 24510554 (-)
LOC103041050 LOC108436299 coding downstream 99695 24419642 ~ 24425384 (-)
LOC103041866 LOC108436338,LOC107672018,LOC107560914,LOC107737637,LOC107741320,LOC108276080 coding downstream 116699 24359390 ~ 24408380 (-)
LOC103043623 LOC108436300 coding downstream 166950 24352959 ~ 24358129 (-)
ikbkg ikbkg coding downstream 175025 24338688 ~ 24350054 (-)
fam110a fam110a coding upstream 45851 24571423 ~ 24605346 (-)
bcl2l1 bcl2l1 coding upstream 137043 24662615 ~ 24703952 (-)
arfgef2 arfgef2,LOC108436330,LOC107671990,LOC107737629,LOC107562465 coding upstream 180175 24705747 ~ 24748112 (-)
pard6b pard6b,LOC108436329,LOC107560924,LOC107562464,LOC107712746,LOC107657018,LOC107737628 coding upstream 226335 24751907 ~ 24794280 (-)
trnaf-gaa_3 NA coding upstream 279999 24805571 ~ 24805643 (-)
G134377 NA non-coding downstream 146686 24361318 ~ 24378393 (-)
G134379 NA non-coding downstream 153600 24370379 ~ 24371479 (-)
G134378 NA non-coding downstream 162246 24362143 ~ 24362833 (-)
G134314 avpr2ab,LOC108436342,LOC107672002,LOC108425559,LOC107657032 non-coding downstream 248033 24276511 ~ 24277046 (-)
G134311 NA non-coding downstream 282305 24242517 ~ 24242774 (-)
G134414 NA non-coding upstream 16901 24542473 ~ 24542852 (-)
G134496 NA non-coding upstream 127812 24653384 ~ 24654091 (-)
G134497 NA non-coding upstream 128594 24654166 ~ 24656572 (-)
G134500 NA non-coding upstream 146833 24672405 ~ 24673789 (-)
G134516 LOC103033727,LOC108436326,LOC108276432 non-coding upstream 291599 24817171 ~ 24820589 (-)
trpc4ap trpc4ap,trpc4apb,LOC107741324,LOC107737634,LOC107562468,LOC107672047,LOC107560917 other downstream 30654 24483965 ~ 24494425 (-)
LOC111194023 NA other downstream 91608 24431159 ~ 24433471 (-)
G134312 LOC108436342 other downstream 252010 24272744 ~ 24273069 (-)
G134093 prim1,LOC107741309 other downstream 893924 23624281 ~ 23631155 (-)
LOC103034468 cdc42,LOC107083933,LOC103386293,LOC100697482,LOC107395067,LOC108435227 other downstream 1608695 22909821 ~ 22916384 (-)
LOC111194123 NA other upstream 96045 24621617 ~ 24631857 (-)
ebp ebp,LOC107672060,LOC107712744 other upstream 281341 24806913 ~ 24809335 (-)
trnah-gug_15 NA other upstream 284859 24810431 ~ 24810502 (-)
G134867 si:rp71-17i16.4,tnnc2,LOC103044939,LOC108434838,LOC107737591,LOC107568845,LOC107672054,LOC101472191 other upstream 1266315 25791887 ~ 25798373 (-)
taf13 taf13,LOC107671955 other upstream 1278505 25804077 ~ 25805824 (-)

Expression


Co-expression Network