G136413


Basic Information

Item Value
gene id G136413
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 30919168 ~ 30919973 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU184525
TTCGAATGTCGCCGTGCGGTGTCCCCTGCAGCGAAGATGTAACCAGTGCCAACCGTGCGTGCAGGGGCACCGTCACGCGCTTCCCCACCAGCAGGTTGCGGGAGGTCCAAATGGCGGCCTTTACGTGGTTCAGGGTGGACCAGAGCGCTGCGAAGTCGGCTGCTGGTATCTTGTCGAGGCCCTGGCCCATCCCGTTTACCGCTACCCGGTAAACTGTAGGCAGGACCTCCCCTGCTGGCAGGCACGGGCATTGCAGGGGGCCGGTTAAGGCCCACAGGTCCCTCGCCACGCTGCACTCCCAGAGCACGTGCCGCACGGTCTCGGGCTCGCCACACCCGGGCCGCGGGCAGATGGGGTTCCTTGACATGCCCCGGGAAAGCATCACGGCCCTGAACGGGAGGATCTCATGAGCAGCCATCCACGACAGGTCCTTGTGCTTGTTCTGAAGAGCGGGGTGGGCGGCGTTCCTCCAAACCAATTTGGCCTCACATAGTGTGAGGCCGGGAACTGGGCTCACCTCCTCCCGGTCCTGCACAAGAGAGACAAGACACTTGGCATTAGTTAAAATGgtgacattttctttttctaaaacatACTTGTTTAAAAACTTTCTGATAAAATCATATTCCTTAGGTAGATTAAAAGACACAGGTGTCCTAAGATCTGGGCTTAAAATCTTGAGGCGTTGCAAGTACGACCCCATACAGAACCTCGCCATCACtgctgtcttgttttgtctggaGGGGTCTGTTGCATACTTTACGTGCAAAGCAGCGAACTTGCTCCCTAAAAACAGGTGGGGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184525 True 806 lncRNA 0.57 1 30919168 30919973

Neighbor

gene id symbol gene type direction distance location
LOC103041051 adcy6,adcy6a,LOC103147814 coding downstream 234341 30658222 ~ 30684827 (-)
LOC103034470 LOC108411656 coding downstream 271434 30635176 ~ 30647734 (-)
LOC103035433 g6pd,LOC108276145,LOC107723128 coding downstream 286298 30610314 ~ 30632870 (-)
naa10 naa10,LOC107693544,LOC107723122,LOC107705681,LOC107696956 coding downstream 312122 30601327 ~ 30607046 (-)
prpf6 prpf6,LOC107673318,LOC107705744,LOC107697009 coding downstream 832607 30057146 ~ 30086561 (-)
scml2 scml2,LOC108275918,LOC107694433,LOC107752426,LOC107564407 coding upstream 104757 31024730 ~ 31080764 (-)
rs1 rs1,LOC107706910,LOC107694435,LOC107691297,LOC107102153 coding upstream 317299 31237272 ~ 31245744 (-)
LOC103041895 NA coding upstream 1552697 32472670 ~ 32501687 (-)
epm2a epm2a coding upstream 2137525 33057498 ~ 33098161 (-)
LOC103043549 LOC108439483,LOC107735267 coding upstream 2185150 33105123 ~ 33116783 (-)
G136410 NA non-coding downstream 4537 30904913 ~ 30914631 (-)
G136390 NA non-coding downstream 162982 30750243 ~ 30756186 (-)
G136255 NA non-coding downstream 476421 30442540 ~ 30442747 (-)
G136225 NA non-coding downstream 591323 30321610 ~ 30327845 (-)
G136198 NA non-coding downstream 744610 30133620 ~ 30174558 (-)
G136415 NA non-coding upstream 8678 30928651 ~ 30929588 (-)
G136416 NA non-coding upstream 11320 30931293 ~ 30931609 (-)
G136427 NA non-coding upstream 27300 30947273 ~ 30947782 (-)
G136435 NA non-coding upstream 48729 30968702 ~ 30969021 (-)
G136439 NA non-coding upstream 55944 30975917 ~ 30976300 (-)
G136173 NA other downstream 863440 30048281 ~ 30055728 (-)
LOC103038817 LOC103038817 other downstream 1638476 29274161 ~ 29280692 (-)
LOC103034081 NA other downstream 1671783 29242243 ~ 29247385 (-)
G135910 NA other downstream 1797497 29067891 ~ 29121671 (-)
LOC103037426 NA other downstream 2104550 28809292 ~ 28814618 (-)
G136691 NA other upstream 1447220 32367193 ~ 32367462 (-)
G136773 NA other upstream 1863101 32783074 ~ 32784304 (-)
pi16 NA other upstream 2566244 33486217 ~ 33511035 (-)
G137043 NA other upstream 2627382 33547355 ~ 33550978 (-)
G137098 NA other upstream 2843501 33763474 ~ 33763827 (-)

Expression


Co-expression Network