LOC103033755


Basic Information

Item Value
gene id LOC103033755
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 28748440 ~ 28762922 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015601527.2
ACCCATACGGCGGGAACTTCTGCGCGCGCGCGAGTTTCTGTCAGTTTGTCAGTTTTTCTCTCAGCAACTTCTTTGGCTCAGCTGAGGTGAACCTCCCGTTTACATTAACTAACTGACTAACAGCTCAAATATTCAGTACAGTTGAGAAAATGGACGAAAAACATGGTAATAAAGAGAAGTCAGCGATTGTGTCCCCCATATCTCAAGCAAATAACACAGagagtaataaaacaaaagtcGAGGTCAAGACAGCAATGACAAACGGacagagtgaagaaaaaaagaagggtAAAGGGTCAAAGCCAGGTGAAACTGATGAACGTACAGGATATGAACAACTAAAACCCTCACAAGCAGAAAAGGAGCCCAGGAAAAGAGTGCACGAGCAAGAGATGAATGGAGCAGTGGTAGGGACGAAGAGAGGTAAAGTGGAAATGAATGGAAGAGAGGATGAAGAGACGACaaaagaaaagacagagaaCGAGAACGATCAGGTTGTGCAGAGAAGTGCAGAAGAGATAGATGATGAGACCCAGCAGACCACAGCCAGTAACTTTGAGTTGTTGGAGGCCATGTTGGATTATTCATTATCTGGTCTAATAGaggacACCAAGGCCATGCTGACTGAGGTGGAATCAATGCAATCCTGTATACAACAGAAAGCTCACAGAGATGAGCAGGAGAGAGGGTCTTGCAGCACAACACTGGacaaagagagcaagaaagagatgAAGGGCAGATCCGTATGTGAGAAAGAAGAGGTTAATAGTGAATCAGATGAATatgttgtGTGGGTGCAGTGTAGCAAAGCTAATTGTGGTAAATGGAGGAAACTCGATGAAGATGTGGATCCCTCAATGCTGCCCGATGACTGGATTTGTGAGAACAACCCAGACCCAGCATTCTGCAGTTGTTCAGCTCCAGAAGAGCAGTCCAGCATGTGTGAGGAAAAAATCTTCTTTAGCAACCTAGTACCAGGATCGCTGGTGTGGGTGCAGCAGAATGGACATTTCTGGTGGCCAGCAATGGTCCAAAGGGATCCAGAGACGGATGACTACCTCGAGTTCCACAGGAAGACGGACCTTGATCCAtgtaaatgtCATGTGACATATTTTGGGGATCCAGTGTGTATTGGCTGGGTTCTGTGCAGCAATGTGAGGAACTACGCAGACCTGTCGGAGAATGATGTCCTCAGTATGTTGGAGTTTCAGGAATTAAAGGAGAAGCTGAAGGATGCCATTTGCATGTCAAAGCAAGCCCTTGACCTGTCCCCTCAGatGCGTTTGGTGAAATTTGGGTTCTGGACACGATATGACTCAGAAGAGGATAGTGATGTCAGAGAGGTTCTGGAGCTCTTCAGTGGAAAGACTGGAAAATACTCTGACGATGAGGATGCATGGCCTAAGAAGCAAAAAAGGTGCCTGAAGAAAAGGGAAGACAAGCATTTAACTGACCTAATGTTTAAAGAAGGATTGAAGAAGAAGAGTTTCGCTCCCTCTTTCTCACAACCAAAGAAGAATAAAACTTCTGAAAAAACAGACGCAGTAAAGCAGCAGGTTCAGGACCAGATGGTACCTGAGAGCACCATGGAAACGTCCCCTGACAGCAGCTGTAGCAACaagcaaaagaagaaaaactgcGGAAGTGAAGAtgtaaagagaaaagagaggaataGAGATGAAGAAGGAAATGATGAAAAGATGGTCAAGAAGCAGGACAAGCAGAAGAACCTACAGAGATGGGAGGATGAGTTTGGCAGTGAAGAAGAGGCGTTCATCGACGGTATGGAAGGAGCCGGTGATGAGGAAGGGTTCCTGGATTCAGATATGGACATTTTGGGCTGCGGAGGAAAGGAAGTAGACCATCTGTCCTGTACAGAGCACGAGGAGCTGGAGGAAGAGCCGTCCAGCTTTTCTCTCATGTTGTTGGAAGAGGAGTAGTGCAAGAAAatattactgtttaaaaaacacacactcatttttGTTGTACCCAATTCATTTGTTGTGTGAATTCTCACATGTTTACGTTAAAGTAGAGTAAATTAAAGTCTGCTTTAAGCTGCAGACAGTTTCAAACTGGATAAGTTACGTCAAAAACTTAAA
>XM_022677483.1
GACCCATACGGCGGGAACTTCTGCGCGCGCGCGAGTTTCTGTCAGTTTGTCAGTTTTTCTCTCAGCAACTTCTTTGGCTCAGCTGAGGTGAACCTCCCGTTTACATTAACTAACTGACTAACAGCTCAAATATTCAGTACAGTTGAGAAAATGGACGAAAAACATGGTAATAAAGAGAAGTCAGCGATTGTGTCCCCCATATCTCAAGCAAATAACACAGagagtaataaaacaaaagtcGAGGTCAAGACAGCAATGACAAACGGacagagtgaagaaaaaaagaagggtAAAGGGTCAAAGCCAGGTGAAACTGATGAACGTACAGGATATGAACAACTAAAACCCTCACAAGCAGAAAAGGAGCCCAGGAAAAGAGTGCACGAGCAAGAGATGAATGGAGCAGTGGTAGGGACGAAGAGAGGTAAAGTGGAAATGAATGGAAGAGAGGATGAAGAGACGACaaaagaaaagacagagaaCGAGAACGATCAGGTTGTGCAGAGAAGTGCAGAAGAGATAGATGATGAGACCCAGCAGACCACAGCCAGTAACTTTGAGTTGTTGGAGGCCATGTTGGATTATTCATTATCTGGTCTAATAGaggacACCAAGGCCATGCTGACTGAGGTGGAATCAATGCAATCCTGTATACAACAGAAAGCTCACAGAGATGAGCAGGAGAGAGGGTCTTGCAGCACAACACTGGacaaagagagcaagaaagagatgAAGGGCAGATCCGTATGTGAGAAAGAAGAGGTTAATAGTGAATCAGATGAATatgttgtGTGGGTGCAGTGTAGCAAAGCTAATTGTGGTAAATGGAGGAAACTCGATGAAGATGTGGATCCCTCAATGCTGCCCGATGACTGGATTTGTGAGAACAACCCAGACCCAGCATTCTGCAGTTGTTCAGCTCCAGAAGAGCAGTCCAGCATGTGTGAGGAAAAAATCTTCTTTAGCAACCTAGTACCAGGATCGCTGGTGTGGGTGCAGCAGAATGGACATTTCTGGTGGCCAGCAATGGTCCAAAGGGATCCAGAGACGGATGACTACCTCGAGTTCCACAGGAAGACGGACCTTGATCCAtgtaaatgtCATGTGACATATTTTGGGGATCCAGTGTGTATTGGCTGGGTTCTGTGCAGCAATGTGAGGAACTACGCAGACCTGTCGGAGAATGATGTCCTCAGTATGTTGGAGTTTCAGGAATTAAAGGAGAAGCTGAAGGATGCCATTTGCATGTCAAAGCAAGCCCTTGACCTGTCCCCTCAGatGCGTTTGGTGAAATTTGGGTTCTGGACACGATATGACTCAGAAGAGGATAGTGATGTCAGAGAGGTTCTGGAGCTCTTCAGTGGAAAGACTGGAAAATACTCTGACGATGAGGATGCATGGCCTAAGAAGCAAAAAAGGTGCCTGAAGAAAAGGGAAGACAAGCAGAAAAAGCGAGCAAAGAGTGGAAGTAAAAAAGAGTGTGCAGAAAGGAGTGGAGAGAaaaagcagcagaagaagagtgAGAATGGAAAGAGTGTtaataagaagaagatggaGGGTGGGGGAAAAGTGGGAAAGCATGCAAGAAATGCAGAGGAAGCTGCACTGAAAGTCACAGAACAGAAAGATTTAACTGACCTAATGTTTAAAGAAGGATTGAAGAAGAAGAGTTTCGCTCCCTCTTTCTCACAACCAAAGAAGAATAAAACTTCTGAAAAAACAGACGCAGTAAAGCAGCAGGTTCAGGACCAGATGGTACCTGAGAGCACCATGGAAACGTCCCCTGACAGCAGCTGTAGCAACaagcaaaagaagaaaaactgcGGAAGTGAAGAtgtaaagagaaaagagaggaataGAGATGAAGAAGGAAATGATGAAAAGATGGTCAAGAAGCAGGACAAGCAGAAGAACCTACAGAGATGGGAGGATGAGTTTGGCAGTGAAGAAGAGGCGTTCATCGACGGTATGGAAGGAGCCGGTGATGAGGAAGGGTTCCTGGATTCAGATATGGACATTTTGGGCTGCGGAGGAAAGGAAGTAGACCATCTGTCCTGTACAGAGCACGAGGAGCTGGAGGAAGAGCCGTCCAGCTTTTCTCTCATGTTGTTGGAAGAGGAGTAGTGCAAGAAAatattactgtttaaaaaacacacactcatttttGTTGTACCCAATTCATTTGTTGTGTGAATTCTCACATGTTTACGTTAAAGTAGAGTAAATTAAAGTCTGCTTTAAGCTGCAGACAGTTTCAAACTGGATAAGTTACGTCAAAAACTTAAA

Function

GO: NA

KEGG:

id description
K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015601527.2 False 2102 mRNA 0.45 15 28748440 28762921
XM_022677483.1 True 2286 mRNA 0.44 16 28748440 28762922

Neighbor

gene id symbol gene type direction distance location
LOC103032387 txk coding downstream 104698 28615887 ~ 28643742 (-)
LOC103039671 NA coding downstream 141049 28603799 ~ 28607391 (-)
g3bp2 g3bp2,zgc:56304,LOC107748926 coding downstream 150746 28579423 ~ 28597694 (-)
cdkl2 LOC108415238 coding downstream 170805 28562662 ~ 28577635 (-)
LOC103038310 NA coding downstream 411563 28326029 ~ 28336877 (-)
LOC103038505 NA coding upstream 20861 28783783 ~ 28803900 (-)
LOC103040686 NA coding upstream 65517 28828439 ~ 28832181 (-)
LOC103041298 NA coding upstream 260501 29023423 ~ 29025434 (-)
LOC111194137 LOC108410735 coding upstream 424497 29187419 ~ 29192687 (-)
camta2 camta2,LOC108410734,LOC107687367,LOC102789477,LOC102194725,LOC102298426 coding upstream 442698 29205620 ~ 29239309 (-)
LOC111194131 NA non-coding downstream 47484 28695315 ~ 28700956 (-)
G135858 NA non-coding downstream 59858 28685501 ~ 28688582 (-)
G135846 NA non-coding downstream 172029 28574951 ~ 28576411 (-)
G135845 NA non-coding downstream 173032 28574723 ~ 28575408 (-)
G135835 NA non-coding downstream 218183 28527876 ~ 28530257 (-)
G135882 NA non-coding upstream 85665 28848587 ~ 28883119 (-)
LOC111194133 NA non-coding upstream 238961 29001883 ~ 29038081 (-)
LOC111194134 NA non-coding upstream 275788 29038710 ~ 29041542 (-)
G135902 NA non-coding upstream 290845 29053767 ~ 29057492 (-)
G135935 NA non-coding upstream 364970 29127892 ~ 29128306 (-)
LOC103032909 pik3ca,zgc:158659,LOC107653898,LOC107571432,LOC105891463,LOC102200943 other downstream 8100 28708643 ~ 28740340 (-)
LOC111188233 NA other downstream 341981 28276067 ~ 28406459 (-)
LOC111194130 NA other downstream 670518 28067510 ~ 28077922 (-)
G135239 NA other downstream 1934862 26812518 ~ 26813578 (-)
G135102 emc1 other downstream 2166698 26580176 ~ 26581742 (-)
LOC103037426 NA other upstream 46370 28809292 ~ 28814618 (-)
G135910 NA other upstream 304969 29067891 ~ 29121671 (-)
LOC103034081 NA other upstream 479321 29242243 ~ 29247385 (-)
LOC103038817 LOC103038817 other upstream 511239 29274161 ~ 29280692 (-)
G136173 NA other upstream 1285359 30048281 ~ 30055728 (-)

Expression


Co-expression Network