G135835


Basic Information

Item Value
gene id G135835
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 28527876 ~ 28530257 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU183758
GTCAGGGTTAGAAATGAGAGTCAGCACTAGGTCAATGTTTGGTCAGAGTAGAGCTGGAGTCAGGGTTAGGTCAGTGTTTGGTAAGGTTGGGGTCAGGGTTAGGACTGAGAGTCAGCACTAGGTCAATGTTTGGTAAGGTTGGGGTCAGGGTTAGAAATGAGAGTCAGCACTAGGTCAATGTTTGGTCAGAGTAGAGCTGGAGTCAGGGTTAGGTCAGTGTTTGGTAAGGTTGGGGTCAGGGTTAGGATTGAGAGTCAGCACTAGGTCAATATTGGGTCAGAGTAAAGCTGGAGTCAGGGTTAGGTCAGTGTTTGGTAGGGGTGGGGTCAGGGTTAGGATTGAGAGTCAGCACTAGGTCAATGTTTGGTCAGAGTAGAGCTGGAGTCAGGGTTAGGTCAGTGTTTGGTAAGGTTGGGGTCAGGGTTAGGATTGAGAGTCAGCACTAGGTCAATGTTGGGTCAGGAAGAGCTGGAATCAGGGTTAGGTCAGTGTTTGGTAAGGTTGGGGTCAGGGTTAGGATTGAGAGTCAGCACTAGGTCAATGTTGGGTCTGGAAGAGCTGGAGTCAGGGTTAGGTCAGAGTTAGGACAGTGTTGGCTAAGGTCAGAATGGGGTCAGAGTTAGGACAGTGTTGGGTACGAGGCCGGAATGGGGTCAGAGTTAGGATAGTGTTGGGTAAGGGTCAGAATGGGGTCTGGGTTATATTTTATCTCATATATTTGTACTTTCAGCCAGTAGACTTAATATTAAACGTAATATTTTGCAGACACGATGCTTTGCTTTATCAATAATACACATAGACAGTTTAAcaagtatatgtttaaatatacaatatccactcactaaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183758 True 850 lncRNA 0.46 3 28527876 28530257

Neighbor

gene id symbol gene type direction distance location
LOC103038310 NA coding downstream 190999 28326029 ~ 28336877 (-)
LOC103040172 NA coding downstream 304434 28205499 ~ 28223442 (-)
LOC103040800 plekhg1,LOC108275720 coding downstream 388317 28086067 ~ 28139559 (-)
tcp1 tcp1,LOC107694622,LOC107669694 coding downstream 473633 28042738 ~ 28054243 (-)
LOC103042328 fam46ab,LOC108443474,LOC107664225,LOC107714964,LOC107751838,LOC107572161 coding downstream 530519 27985090 ~ 27997357 (-)
cdkl2 LOC108415238 coding upstream 32405 28562662 ~ 28577635 (-)
g3bp2 g3bp2,zgc:56304,LOC107748926 coding upstream 49166 28579423 ~ 28597694 (-)
LOC103039671 NA coding upstream 73542 28603799 ~ 28607391 (-)
LOC103032387 txk coding upstream 85630 28615887 ~ 28643742 (-)
LOC103033755 NA coding upstream 218183 28748440 ~ 28762922 (-)
G135832 NA non-coding downstream 5887 28520075 ~ 28521989 (-)
G135649 NA non-coding downstream 79614 28446940 ~ 28448262 (-)
G135643 NA non-coding downstream 87114 28409171 ~ 28440762 (-)
G135635 NA non-coding downstream 137440 28389361 ~ 28390436 (-)
G135632 NA non-coding downstream 158293 28367665 ~ 28369583 (-)
G135845 NA non-coding upstream 44466 28574723 ~ 28575408 (-)
G135846 NA non-coding upstream 44694 28574951 ~ 28576411 (-)
G135858 NA non-coding upstream 155244 28685501 ~ 28688582 (-)
LOC111194131 NA non-coding upstream 165058 28695315 ~ 28700956 (-)
G135882 NA non-coding upstream 318330 28848587 ~ 28883119 (-)
LOC111188233 NA other downstream 121417 28276067 ~ 28406459 (-)
LOC111194130 NA other downstream 449954 28067510 ~ 28077922 (-)
G135239 NA other downstream 1714298 26812518 ~ 26813578 (-)
G135102 emc1 other downstream 1946134 26580176 ~ 26581742 (-)
G134931 uba1,LOC107737583,LOC107672015,LOC107699604 other downstream 2522942 25987191 ~ 26004934 (-)
LOC103032909 pik3ca,zgc:158659,LOC107653898,LOC107571432,LOC105891463,LOC102200943 other upstream 178386 28708643 ~ 28740340 (-)
LOC103037426 NA other upstream 279035 28809292 ~ 28814618 (-)
G135910 NA other upstream 537634 29067891 ~ 29121671 (-)
LOC103034081 NA other upstream 711986 29242243 ~ 29247385 (-)
LOC103038817 LOC103038817 other upstream 743904 29274161 ~ 29280692 (-)

Expression


Co-expression Network