CI01000012_07374223_07375676 (IQCC)


Basic Information

Item Value
gene id CI01000012_07374223_07375676
gene name IQCC
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7374047 ~ 7375676 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_07374223_07375676.mRNA
GGGAAGAAAAACAATCAGCCGTTCAAACACAGCGGCGCTATGAACGAACAGAAATTGATTCTGATATTAACTCAATTTCAGGCTCAGTGTCGCGGTTATGTGATGAGGCAAGGTCTGAGTTTGGTTCAGACTCAGTTTGAGGACGTCGTGCGAGAGATTGATGGAGGATTGGATCACCTGCAGTGGAGAGGAAACATCATTCCCAAACCTCACTTTACTGACACTGAAAGTCTACTGCTGCAGTACGAACGCTCCAGATTTCAGTGCCATGACTGTCAGGTTGACTCCGAGAGAGAACAGAAGATAGAGGATGAGGACAGTGAGAAATCTCTCCCACAGTCTGAAATCCACATACCAGAGAGAGACGAAGCTCCTGAAACGGCCAGCAGAGACACTTCCACACCTGTGGACGGTATTGTAGAAAAGACCGGAGAGAACGTGGTTGAACGAAACCTGACAGATGATCCTATTACATTTTGCAGTGCTGTGAATTCAGATGTTAGCCACAGCAGCTTATTTCAGACAGGACCAGGTTTGCATTCAGTTTTGAAAGACACGGCACACACTCCTGACTCTCTGAAGCAGCAGCGGAGCACTTTGGCCATGGAGCTGCTGTGGATCCAGCAAGCCATCAGTAGCAGAAAGAAATATCTCACCCTCAAACAGAGAATGAATGTGTCACACTGATACCGGACCAGTTTTGAAGCGGATCAACGTTATGAGAGATGTTTTTCTCATTTCTTTGTAGCATTTACAGCACAGAATGGTTGTAAATCATGTTTATTTATAAGTTTGTTTTGTCCATAAATGTGTCTGTTAAAGAAGAGTTTCTATTTTTGTACAAATGACATTTGAGAAATAAA

Function

symbol description
iqcc Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human IQCC (IQ motif containing C).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_07374223_07375676.mRNA True 863 mRNA 0.44 5 7374047 7375676

Neighbor

gene id symbol gene type direction distance location
CI01000012_07368295_07372257 NA coding downstream 1790 7368295 ~ 7372257 (-)
CI01000012_07366635_07367888 NA coding downstream 6159 7366480 ~ 7367888 (-)
CI01000012_07356934_07358497 NA coding downstream 15435 7356863 ~ 7358612 (-)
CI01000012_07322669_07329009 NA coding downstream 44535 7322633 ~ 7329512 (-)
CI01000012_07316139_07320354 NA coding downstream 52854 7314756 ~ 7321193 (-)
CI01000012_07379927_07381734 CCDC28B coding upstream 2858 7378534 ~ 7381734 (-)
CI01000012_07388341_07401600 NA coding upstream 12665 7388341 ~ 7401756 (-)
CI01000012_07406125_07408361 NDUFAF1 coding upstream 30439 7406115 ~ 7408361 (-)
CI01000012_07504355_07506926 NA coding upstream 127784 7503460 ~ 7506926 (-)
CI01000012_07537907_07544112 RDH11, RDH12 coding upstream 161765 7537441 ~ 7544112 (-)
G74113 NA non-coding downstream 28263 7345481 ~ 7345784 (-)
G74130 NA non-coding downstream 35862 7334138 ~ 7338185 (-)
G74137 NA non-coding downstream 105772 7266989 ~ 7268275 (-)
G74296 NA non-coding downstream 110022 7263770 ~ 7264025 (-)
G74363 NA non-coding upstream 188046 7563722 ~ 7563999 (-)
G74376 NA non-coding upstream 222237 7597913 ~ 7598119 (-)
G74378 NA non-coding upstream 225465 7601141 ~ 7601382 (-)
G74381 NA non-coding upstream 317700 7693376 ~ 7694697 (-)
G74477 NA non-coding upstream 457686 7833362 ~ 7836466 (-)
G72629 NA other downstream 1226553 6147011 ~ 6147494 (-)
G72294 NA other downstream 1908190 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1957267 5413369 ~ 5416780 (-)
G72204 NA other downstream 2071841 5293773 ~ 5302206 (-)
G74648 NA other upstream 888653 8264329 ~ 8265654 (-)
G74701 NA other upstream 991343 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 1692230 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 1695695 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 1707060 9081877 ~ 9083489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location